Table 1 List of known genes located within 100 kb of the DNA sequences isolated after ChIP that are putative targets of p63.
p63 Binding Fragment | Chromosome Number | Nearest gene | Location | Description | Accession Number | Gene Ontology |
|---|---|---|---|---|---|---|
A2 | 3p12 | SHQ1 | 3' end | SHQ1 homolog (S. cervisiae) | NM_018130 | RNA processing |
A4 | 7p15 | AHR* | intron 10 | Aryl hydrocarbon receptor | NM_001621 | Transcription |
A5 | 13q22 | KLF12 | intron 6 | Kruppel-like factor 12 | NM_0072498 | Transcription |
A6 | 11p15 | ARNTL* | 5'end | Ayrl hydrocarbon receptor nuclear translocator-like | NM_001178 | Transcription |
B2 | 11cenq22 | ME3 | intron 1 | Malic enzyme 3 | NM_001014811 | Oxioreductase activity |
B5 | 12q13 | STAT6* | intron 19 | Signal transducer and activator of transcription 6 | NM_003153 | Transcription |
C3 | 7p15.1 | ZNRF2* | intron 1 | Zinc and ring finger 2 | NM_147128 | Ubiquitin ligase activity |
C6 | 6q22.31 | HSF2* | intron 10 | Heat shock transcription factor 2 | NM_004506 | Transcription |
C10 | 2q31-q32.1 | CHN1 | intron 5 | Chimerin 1 | NM_001025201 | Signal transduction |
C11 | 8q24.13 | FBXO32* | intron 4 | F-box protein 32 | NM_058229 | Protein degradation |
D2 | 5q21.3 | PJA2* | 5' end | Praja2, RING-H2 motif containing | NM_014819 | Ubiquitin ligase |
D5 | 5q31.3 | NR3C1* | intron 2 | Nuclear receptor subfamily 3 | NM_00176 | Signal transduction |
D7 | Xq21.1 | POF1B* | 5' end | Premature ovarian failure | NM_024921 | Cytoskeleton organization |
D9 | 8q12.3 | YTHDF3 | 3' end | YTH domain family member 3 | NM_152758 | Unknown |
D12 | 6p21.3 | DDR1* | intron 3 | Discoidin domain receptor, family member 1 | NM_013993 | Cell adhesion |
E2 | 10p12.1 | GPR158* | intron 4 | G-protein coupled receptor 158 | NM_020752 | Signal transduction |
E6 | 5q31.1 | SLC22A4 | intron 1 | Solute carrier family 22, member 4 | NM_003059 | Transport |
E12 | 9q13 | B4GALT1* | intron 1 | UDP-Gal:betaGLCNAc beta 1,4-galtosyltransferase | NM_001497 | Carbohydrate metabolism |
G9 | 12q24.31 | AACS | 3'end | Acetoacetyl-CoA synthetase | NM_145248 | Metabolism |
H3 | 2q21.1 | WASPIP* | intron 2 | Wiskott-Aldrich syndrome protein interacting protein | NM_003387 | Cytoskeleton organization |
H4 | 15q21.2 | SPPL2A | 5' end | Signal peptide peptidase-like 2A | NM_032802 | Protein degradation |
H6 | 7p15-p14 | TBX20 | 5' end | T-Box 20 | NM_020417 | Transcription |
H8 | 12q13 | SLC38A4 | 5' end | Solute carrier family 38, member 4 | NM_018018 | Transport |
H12 | 3q27 | MCCC1 | intron 10 | Methylcrotonoyl-Coenzyme A caboylase 1 | NM_020166 | Metabolism |
I5 | 22q12.3 | SYN3* | intron 6 | Synapsin 3 | NM_003490 | Neurotransmitter secretion |
J1 | 7p12-p11.2 | GRB10 | intron 3 | Growth factor receptor-bound protein 10 | NM_00100549 | Signaling |
J2 | 1q21.2 | NOTCH2NL* | intron 1 | Notch homolog 2 | NM_203458 | Signal transduction |
J3 | 14q32.3 | MARK3 | intron 4 | MAP-microtubule affinity regulating kinase 3 | NM_002376 | Kinase activity |
J5 | 5q35.3 | MXD3 | intron 4 | MAX dimerization protein 3 | NM_031300 | Transcription |
J7 | 8q12.1 | RGS20* | intron 4 | Regulator of G-protein 20 | NM_003702 | Signal transduction |
E1 | 3q25.3 | TADA3L | 3' end | Transcriptional adaptor 3 | NM_006354 | Transcription |