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Table 3 Ranking of candidate reference genes in order of stability

From: Identification of valid reference genes for the normalization of RT qPCR gene expression data in human brain tissue

A

  

MEDIAL TEMPORAL GYRUS

AD + Controls

PD + Controls

DLB + Controls

*UBC/*HMBS

*GAPDH/*SDHA

*B2M/*SDHA

*SDHA

*HMBS

*GAPDH

*YWHAZ

TBP

TBP

B2M

UBC

UBC

GAPDH

B2M

HMBS

RP II

RP II

RP II

TBP

YWHAZ

YWHAZ

CEREBELLUM

AD + Controls

PD + Controls

DLB + Controls

*YWHAZ/*GAPDH

*HMBS/*GAPDH

*UBC/*GAPDH

*B2M

*SDHA

*B2M

SDHA

YWHAZ

HMBS

UBC

UBC

TBP

HMBS

TBP

RP II

TBP

RP II

SDHA

RP II

B2M

YWHAZ

B

  

GROUPED CEREBELLUM + MEDIAL TEMPORAL GYRUS

AD + Controls

PD + Controls

DLB + Controls

*B2M/*GAPDH

*RP II/*B2M

*UBC/*GAPDH

*SDHA

*UBC

*B2M

*UBC

*TBP

HMBS

*HMBS

SDHA

RP II

RP II

GAPDH

TBP

YWHAZ

HMBS

SDHA

TBP

YWHAZ

YWHAZ

  1. Candidate references genes were ranked in order of stability for each group, with the two most stable genes at the top and the least stable at the bottom. An * indicates the set of reference genes which should be employed for the normalization of RT qPCR data for each group as determined from analysis of the pairwise variation.