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Table 1 PCR primers used in chromatin immunoprecipitation

From: Characterization of two functional NKX3.1 binding sites upstream of the PCAN1 gene that are involved in the positive regulation of PCAN1 gene transcription

Names

Sequences

Product sizes

NBS1 primers

F: GATTCTTTGACTGGTCTGGCACAC

 
 

R: TTATCCATTGTGCCTGGAGCTGAG

170 bp (spanning NBS1)

BNS2 primers

F: TCCTACTAACGGCATGTAAGGAGG

 
 

R: ATTGCCATGTCTGGACTGTGAGTG

170 bp (spanning NBS2)

NBS3 primers

F: AAGAATGAGCTGATCCTCCTATGC

 
 

R: GGTTTAGTAATAGACTGGGCACCA

150 bp (spanning NBS3)

NBS4,5 primers

F: GTGTAGCAGGTAAATCAGTGTGAG

 
 

R: TCAGCTGACGAGCAACTTCAATTC

180 bp (spanning NBS4 and 5)

  1. NBS1 F and R span NBS1;
  2. NBS2 F and R span NBS2; NBS3 F and R span NBS3; BNS4,5 F and R span NBS4 and NBS5