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Table 2 Sequences of identified alternative 5'-end exons in 5'-UTRs of human PPARδ transcripts

From: Alternative splicing of human peroxisome proliferator-activated receptor delta (PPARdelta):effects on translation efficiency and trans-activation ability

5'-end exon Size (bp) Genomic position
downstream of exon 2 (bp)
5'-end 5'-splice donor
2a 79 1774 CCCAGTGGCAGC TCGCAGgt agga
2c 883 5017 GCCAGTTCTTTT TGTGAGgt aatg
2c 318 5582 CTTGATGCTGTT TGTGAGgt aatg
2e 180 49761 CAACCTCCCTGC TGTCCTgt gagt
  1. The genomic positions of exons were deduced using the human PPARδ RefSeq [GenBank: NM_006238]. Upper-case and lower-case letters indicate exon and intron sequences, respectively. The consensus splice donor sequences are in bold letters. The relative positions of 5'-ends in the gene are also illustrated in Figure 1B, 5'-UTRs denoted H-K.