Table 2 Optimal RNA hexamer consensus sequences for high-affinity STAR protein binding
From: High-affinity consensus binding of target RNAs by the STAR/GSG proteins GLD-1, STAR-2 and Quaking
STAR protein | Hexamer consensus |
|---|---|
GLD-1 | 5'-(U > G > C/A)A(C > A)U(C/A)A-3' |
Qk-1 | 5'-NA(A>C)U(A>>C)A-3' |
STAR-2 | 5'-UA(A>C)U(A>>C)A-3' |