Table 1 Candidate qPCR reference genes tested in this study with the putative function of the proteins they encode and accession numbers of the produced epaulette shark gene sequences.
From: Elasmobranch qPCR reference genes: a case study of hypoxia preconditioned epaulette sharks
Symbol | Gene (homolog) name | Function | Genbank accession |
|---|---|---|---|
actc1 | alpha-actin, cardiac muscle 1 | Structural protein | GU983379 |
dnaja2 | dnaJ subfamily A 2 (Hsp40) | Chaperone | GQ152302 |
eef1b | eukaryotic translation elongation factor 1 beta | Protein synthesis | GU983380 |
hprt | hypoxanthine phosphoribosyltransferase 1 | Purine nucleotide synthesis | GQ152303 |
mrip | myosin phosphatase-Rho interacting protein | Component of the myosin phosphatase complex | GQ152304 |
polr2f | polymerase (RNA) II (DNA directed) polypeptide F | Component of RNA polymerase II | GQ152305 |
rpl6 | 60S ribosomal protein L6 | Component of the large 60S ribosomal subunit | GU983381 |
tubb2 | tubulin beta 2 | Structural protein | * |
ubq | ubiquitin | Protein degradation | GQ152306 |