Skip to main content

Table 1 List of primers used for qRTPCR.

From: Inflammation in the avian spleen: timing is everything

Target

Identity

Sequence

Accession #

Size

Bmal1

Fwd

ggaattccaggaggaacaaga

AF205219

60

 

Rv

ttcttcagcaatcatccttcc

  

Bmal2*

Fwd

gaagtccggtataaaccttcgtt

AF246958

65

 

Rv

gcagccctaaggattaactgtct

  

Clock

Fwd

acacgcatgatagaggcaaa

AF246959

62

 

Rv

tgttcttgaattttccgcaact

  

Cry1*

Fwd

cggacctgtacaaaaaggtaaaa

NM_204245

61

 

Rv

agctggccatagagggagag

  

Cry2

Fwd

tctggcgggagtttttctac

NM_204244

60

 

Rv

cctccatgcgatcaaacttc

  

Per2

Fwd

cgaggtcagggggttctact

NM_204262

61

 

Rv

gatatcagcttgctgctcagg

  

Per3*

Fwd

tttaggctctcactcctgtgaa

AY046567

60

 

Rv

ttgctgtttttcccactgtct

  

IL-1β

Fwd

ggtggccatgaccaaact

NM_204524

61

 

Rv

caggtcgctgtcagcaaag

  

IL-2

Fwd

gagtgcacccagcaaactct

NM_204153

66

 

Rv

ttcagtttctttcttcagagtaacca

  

IL-6*

Fwd

caggacgagatgtgcaagaa

NM_204628

64

 

Rv

tgttccggacgagcatct

  

IL-12b

Fwd

ccaccgaagtgaaggagttc

NM_213571

63

 

Rv

cgtgggtcttagcagacagg

  

IL-18*

Fwd

agagcatgggaaaatggttg

NM_204608

60

 

Rv

ccaggaatgtctttgggaac

  

TNF ά

Fwd

acaaaatttgcaggctgtttc

AY765397

60

 

Rv

ctgaaataaacaggcacaaaagag

  

GAPDH*

Fwd

ggagtccactggtgtcttcac

NM_204305

64

 

Rv

cttagcaccacccttcagatg

  
  1. Fwd = forward primer; Rv = reverse primer; Size = expected amplicon size. Primer pairs that also spanned an intron are indicated by an *.