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Table 1 Structure of hobo episomes from D. melanogaster

From: Transpositionally active episomal hAT elements

left ITRa

Intercalary DNA

right ITRa

no.b

 

3

T

5

A

3

AT

1

TTCTTCTc

1

AGAACTTCTCTGc

1

ATGCGGGCTGCAGTTCTCTGc

1

 

-187

1

 

-228

1

 

-235

1

 

-275

1

 

-364

1

 

-592

1

GG

-1

1

A

-19

1

ACAACGA

-12

1

-11

 

1

-93

 

2

-120

 

1

-125

 

1

-143

 

2

-198

 

1

-274

 

1

-294

 

1

-2

 

-4

1

-18

 

-6

1

-11

GCACAGTCAACGATCGCCGCA

-248

1

-43

 

-18

1

  1. aarrows represent intact ITRs and their orientation. The size of deletions is indicated by negative numbers.
  2. bnumber recovered.
  3. csequences related to hobo ITR (right ITR: TGCTGTTCTCTG)