From: Messenger RNA profile analysis deciphers new Esrrb responsive genes in prostate cancer cells
Term (down-regulated genes) | Count | P value |
---|---|---|
GO:0042273 ~ ribosomal large subunit biogenesis | 4 | 0.007 |
GO:0006297 ~ nucleotide-excision repair, DNA gap filling | 4 | 0.032 |
GO:0006541 ~ glutamine metabolic process | 4 | 0.042 |
GO:0009083 ~ branched chain family amino acid catabolic process | 5 | 0.001 |
GO:0042274 ~ ribosomal small subunit biogenesis | 5 | 0.001 |
GO:0009081 ~ branched chain family amino acid metabolic process | 5 | 0.004 |
GO:0006904 ~ vesicle docking during exocytosis | 5 | 0.016 |
GO:0048278 ~ vesicle docking | 5 | 0.021 |
GO:0006958 ~ complement activation, classical pathway | 5 | 0.031 |
GO:0022406 ~ membrane docking | 5 | 0.038 |
GO:0002455 ~ humoral immune response mediated by circulating immunoglobulin | 6 | 0.008 |
GO:0009060 ~ aerobic respiration | 6 | 0.014 |
GO:0006635 ~ fatty acid beta-oxidation | 7 | 0.001 |
GO:0009062 ~ fatty acid catabolic process | 7 | 0.003 |
GO:0019395 ~ fatty acid oxidation | 7 | 0.005 |
GO:0034440 ~ lipid oxidation | 7 | 0.005 |
GO:0033559 ~ unsaturated fatty acid metabolic process | 7 | 0.019 |
GO:0009064 ~ glutamine family amino acid metabolic process | 7 | 0.020 |
GO:0019228 ~ regulation of action potential in neuron | 7 | 0.024 |
GO:0006289 ~ nucleotide-excision repair | 7 | 0.026 |
GO:0051591 ~ response to cAMP to cAMP | 8 | 0.002 |
GO:0006800 ~ oxygen and reactive oxygen species metabolic process | 8 | 0.021 |
GO:0001508 ~ regulation of action potential | 8 | 0.023 |
GO:0009566 ~ fertilization | 8 | 0.046 |
GO:0044242 ~ cellular lipid catabolic process | 9 | 0.013 |
GO:0007160 ~ cell–matrix adhesion | 9 | 0.032 |
GO:0060627 ~ regulation of vesicle-mediated transport | 9 | 0.046 |
GO:0009063 ~ cellular amino acid catabolic process | 10 | 0.002 |
GO:0045333 ~ cellular respiration | 10 | 0.020 |
GO:0007568 ~ aging | 10 | 0.040 |
GO:0016485 ~ protein processing | 10 | 0.044 |
GO:0006364 ~ rRNA processing | 11 | 0.005 |
GO:0016072 ~ rRNA metabolic process | 11 | 0.007 |
GO:0006887 ~ exocytosis | 11 | 0.022 |
GO:0009310 ~ amine catabolic process | 12 | 0.000 |
GO:0008203 ~ cholesterol metabolic process | 12 | 0.001 |
GO:0016125 ~ sterol metabolic process | 12 | 0.003 |
GO:0042391 ~ regulation of membrane potential | 12 | 0.024 |
GO:0015980 ~ energy derivation by oxidation of organic compounds | 12 | 0.038 |
GO:0042254 ~ ribosome biogenesis | 13 | 0.005 |
GO:0016053 ~ organic acid biosynthetic process | 14 | 0.013 |
GO:0046394 ~ carboxylic acid biosynthetic process | 14 | 0.013 |
GO:0022613 ~ ribonucleoprotein complex biogenesis | 14 | 0.038 |
GO:0016042 ~ lipid catabolic process | 15 | 0.013 |
GO:0006457 ~ protein folding | 15 | 0.016 |
GO:0034470 ~ ncRNA processing | 15 | 0.025 |
GO:0022900 ~ electron transport chain | 16 | 0.000 |
GO:0032940 ~ secretion by cell | 16 | 0.026 |
GO:0016054 ~ organic acid catabolic process | 17 | 0.000 |
GO:0046395 ~ carboxylic acid catabolic process | 17 | 0.000 |
GO:0034660 ~ ncRNA metabolic process | 19 | 0.008 |
GO:0006631 ~ fatty acid metabolic process | 21 | 0.000 |
GO:0046903 ~ secretion | 22 | 0.014 |
GO:0006414 ~ translational elongation | 25 | 0.000 |
GO:0008610 ~ lipid biosynthetic process | 26 | 0.002 |
GO:0006091 ~ generation of precursor metabolites and energy | 31 | 0.000 |
GO:0006412 ~ translation | 38 | 0.000 |
GO:0016192 ~ vesicle-mediated transport | 39 | 0.003 |
GO:0055114 ~ oxidation reduction | 54 | 0.000 |
Term (up-regulated genes) | Count | P value |
---|---|---|
GO:0002220 ~ innate immune response activating cell surface receptor signaling pathway | 2 | 0.045 |
GO:0048712 ~ negative regulation of astrocyte differentiation | 2 | 0.045 |
GO:0000724 ~ double-strand break repair via homologous recombination | 3 | 0.020 |
GO:0000725 ~ recombinational repair | 3 | 0.020 |
GO:0045987 ~ positive regulation of smooth muscle contraction | 4 | 0.001 |
GO:0045933 ~ positive regulation of muscle contraction | 4 | 0.002 |
GO:0006940 ~ regulation of smooth muscle contraction | 4 | 0.009 |
GO:0050768 ~ negative regulation of neurogenesis | 4 | 0.015 |
GO:0010721 ~ negative regulation of cell development | 4 | 0.018 |
GO:0006937 ~ regulation of muscle contraction | 4 | 0.050 |
GO:0048704 ~ embryonic skeletal system morphogenesis | 5 | 0.004 |
GO:0048706 ~ embryonic skeletal system development | 5 | 0.012 |
GO:0031344 ~ regulation of cell projection organization | 5 | 0.019 |
GO:0007411 ~ axon guidance | 5 | 0.035 |
GO:0051258 ~ protein polymerization | 6 | 0.000 |
GO:0043623 ~ cellular protein complex assembly | 6 | 0.039 |
GO:0050767 ~ regulation of neurogenesis | 6 | 0.042 |
GO:0048705 ~ skeletal system morphogenesis | 7 | 0.002 |
GO:0060284 ~ regulation of cell development | 7 | 0.031 |
GO:0007018 ~ microtubule-based movement | 8 | 0.000 |
GO:0051960 ~ regulation of nervous system development | 8 | 0.007 |
GO:0006916 ~ anti-apoptosis | 8 | 0.010 |
GO:0007017 ~ microtubule-based process | 8 | 0.027 |
GO:0001501 ~ skeletal system development | 9 | 0.031 |
GO:0006917 ~ induction of apoptosis | 9 | 0.031 |
GO:0012502 ~ induction of programmed cell death | 9 | 0.032 |
GO:0045596 ~ negative regulation of cell differentiation | 10 | 0.001 |
GO:0040008 ~ regulation of growth | 10 | 0.017 |
GO:0043066 ~ negative regulation of apoptosis | 10 | 0.021 |
GO:0043069 ~ negative regulation of programmed cell death | 10 | 0.023 |
GO:0060548 ~ negative regulation of cell death | 10 | 0.023 |
GO:0022403 ~ cell cycle phase | 10 | 0.049 |
GO:0006928 ~ cell motion | 12 | 0.021 |
GO:0042127 ~ regulation of cell proliferation | 17 | 0.018 |
GO:0042981 ~ regulation of apoptosis | 18 | 0.011 |
GO:0043067 ~ regulation of programmed cell death | 18 | 0.012 |
GO:0010941 ~ regulation of cell death | 18 | 0.012 |
GO:0006355 ~ regulation of transcription, DNA-dependent | 29 | 0.047 |
GO:0051252 ~ regulation of RNA metabolic process | 30 | 0.038 |
GO:0006350 ~ transcription | 43 | 0.000 |
GO:0045449 ~ regulation of transcription | 48 | 0.001 |