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Table 2 Primers

From: Regulation of expression of two LY-6 family genes by intron retention and transcription induced chimerism

Primer

Name

Sequence

PR_1

G5Bh-int-F

ATGAAGGTCCATATGCTTGTAGG

PR_2

G5Bh-int-R

CATAATAGATGGTGATCACCATGCAC

PR_3

G5Bh-UTR-F

CTCAGGAACTGCCCATCTCCCCAG

PR_4

G5Bh-UTR-R

GGGTGTTACAGAAAGATATTTGCAC

PR_5

G5Bh-ex3-R

TCAGGAAGGGTGAGGTGTCAAG

PR_6

G5B real time_spl

TGTCGGGAACAGGAACCTTT

PR_7

G5B real time_ret

GGGCCCCACTTACCCTTT

PR_8

G6Dh-int-F

ATGAAACCCCAGTTTGTTGGG

PR_9

G6Dh-int-R

GGTTTCCAGGTAGCTTGATCTGTTCC

PR_10

G6Dh-UTR-F

GGTCCTGACACGGGCAGACTGC

PR_11

G6Dh-UTR-R

GTTCCCTTCTCTACTCCTACTCCCC

PR_12

G6Dh-ex3-R

CTATCCGCTCCACAGTCCTGG

PR_13

b-actin-F

CTTCGCGGGCGACGATGC

PR_14

b-actin-R

TGGTGGTGAAGCTGTAGCC

PR_15

b-globin-F

ATGGTGCATCTGACTCCTGAGG

PR_16

b-globin-R

CTGAAGTTCTCAGGATCCACGTG

PR_17

GAPDH-F

ATGGGGAAGGTGAAGGTCGGAGTC

PR_18

GAPDH-R

GCGGCCATCACGCCACAGTTTC

PR_19

cMYC RT-F

ATGCCCCTCAACGTTAGCTTCACC

PR_20

cMYC RT-R

CAGGACTTGGGCGAGCTGCTG

PR_21

cMYC intr-F

CAGGCTTAGATGTGGCTCTTTGGG

PR_22

cMYC intr-R

TTCGCCTCTTGACATTCTCCTC

PR_23

GAPDH_REALT-F

ATCAGCAATGCCTCCTGCAC

PR_24

GAPDH_REALT-R

GGCATGGACTGTGGTCATGA

PR_25

ACTIN_REALT-F

GATCATTGCTCCTCCTGAGC

PR_26

ACTIN_REALT-R

CCTGCTTGCTGATCCACATC

PR_27

g5biF hindIII

CGGAAGCTTGTAAGTGGGGCCCAGGGGCAGGGAG

PR_28

g5biR hindIII

CGGAAGCTTCTGGGGAGGCAGAAGGAGGGATGGA

PR_30

g6diF hindIII

CGGAAGCTTGTAAGGAGGCGGCCAGCTAGCTTCT

PR_31

g6diR NcoI

CGGCCATGGCTGGCAGGAGAAAAGAGGCGCTGGA

PR_32

g5biF PstI

CGGCTGCAGGTAAGTGGGGCCCAGGGGCAGGGAG

PR_33

g5biR EcoRV

CGGGATATCCTGGGGAGGCAGAAGGAGGGATGGA

PR_34

g6diF PstI

CGGCTGCAGGTAAGGAGGCGGCCAGCTAGCTTCT

PR_35

g6diR EcoRV

CGGGATATCCTGGCAGGAGAAAAGAGGCGCTGGA

PR_36

G5BF+25

GAAGCTTGGTGGGCTTCACAGTAGGAAAGGAAGCTTC

PR_37

G5BR+25

GAAGCTTCCTTTCCTACTGTGAAGCCCACCAAGCTTC

PR_38

G5BMutF+25

CGGAAGCTTCTGCAGCAAAGTGGGGCCC

PR_39

G5BMutR+25

GCCAAGCTTGATATCTCGGGGAGGCAGA

PR_40

pGL3c39f

CTGCGATCTGCATCTCAATTAG

PR_41

pGL3c489r

ATATCGTTTCATAGCTTCTGCCA

PR_42

CSNKh-ext-ex1-2

CCGTCCAGCCGCTGACGTGAAG

PR_43

CSNK-int-ex2

ATGAGCAGCTCAGAGGAGGTGTC

PR_44

CSNK-ext-ex5

GACTTTGGTTACTGTCCTCGTGT

PR_45

CSNK-int-ex5

TGTGAGAACCAGCCAATGCTTCC

PR_46

CSNK-ext-ex6

GACATCCCAGGTGAAGCCATGG

PR_47

CSNK-int-ex6

CTCTACTGCCCCAAGTGCATGG

PR_48

CSNKh-ext-R

CAAAGACTGCAGGACAGGTGG

PR_49

CSNK-int-R

TCAGCGAATCGTCTTGACTGG

PR_50

G6Fh-ext-ex1

CAAGAGAACTTGGCAGGCTC

PR_51

G6Fh-int-ex1

CCCCATGGCAGTCTTATTCC

PR_52

G6Fh-ext-ex4

CCCTCTGTGCCCCTTCCACG

PR_53

G6Fh-int-ex4

GGGACATGCCTTGGATTCTG