Table 5 Whole organs (head kidneys): ranking of the reference gene candidate genes in all samples and within infection treatments, respectively.
all (n = 54) | Infected/Infected (n = 13) | Control/Infected (n = 14) | Infected/Control (n = 12) | Control/Control (n = 15) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Reference gene | Nf | gN | BK | Nf | gN | BK | Nf | gN | BK | Nf | gN | BK | Nf | gN | BK |
b2m | 1 | 3 | 5 | 5 | 5 | 5 | 2 | 3 | 5 | 1 | 4 | 4 | 2 | 4 | 6 |
hprt1 | 2 | 4 | 6 | 2 | 4 | 4 | 1 | 4 | 4 | 4 | 6 | 6 | 3 | 5 | 5 |
ubc | 3 | 1 | 1 | 3 | 1 | 1 | 3 | 1 | 3 | 5 | 1 | 1 | 4 | 1 | 1 |
eef1a | 4 | 5 | 4 | 4 | 6 | 6 | 5 | 5 | 6 | 3 | 3 | 3 | 1 | 3 | 3 |
rpo2 | 5 | 6 | 3 | 1 | 1 | 3 | 7 | 7 | 1 | 2 | 5 | 5 | 6 | 6 | 4 |
rpl13a | 6 | 1 | 2 | 6 | 3 | 2 | 4 | 1 | 2 | 6 | 1 | 2 | 5 | 1 | 2 |
taf2 | 7 | 7 | 7 | 7 | 7 | 7 | 6 | 6 | 7 | 7 | 7 | 7 | 7 | 7 | 7 |