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Table 1 Sequences of antisense oligonucleotides (ASOs) employed in the experiments

From: Antisense oligonucleotide-induced alternative splicing of the APOB mRNA generates a novel isoform of APOB

ASO name

Sequence (5'-3') ACGU = 2'O-methyl RNA bases, acgu = RNA bases

skip 27-5

AUAAAAGCUCCAUACUGAAG

skip 27-3

CAAAACUGUAUAGGAGAGAU

skip 27–53

AUAAAAGCUCCAUACUGAAGCAAAACUGUAUAGGAGAGAU

skip 27-5B

AUAAAAGCUCCAUACUGAAGAUUUUAUUAGAUUCAUAACA

skip 27-3B

CUGUAUAGGAGAGAUUUUGUAUUUUAUUAGAUUCAUAACA

skip 27-3B scram

CAAGUAGAUAUUAUAUGUUGUUACUUGUAUAUAUCGAAUG

skip 27-B

AUUUUAUUAGAUUCAUAACA

skip 27–53 A1

AUAAAAGCUCCAUACUGAAGCAAAACUGUAUAGGAGAGAUucgaguaugauagggacuuagggug

skip 27–53 mut A1

AUAAAAGCUCCAUACUGAAGCAAAACUGUAUAGGAGAGAUucgaguaugauacgcacuuacgcug

skip 27-3B A1

CUGUAUAGGAGAGAUUUUGUAUUUUAUUAGAUUCAUAACAucgaguaugauagggacuuagggug

skip 27-3B mut A1

CUGUAUAGGAGAGAUUUUGUAUUUUAUUAGAUUCAUAACAucgaguaugauacgcacuuacgcug

skip 27-ex 6–25

UCUUCGAUUUUGUGUGUUCC

skip 27-ex 31–50

UUUAGUCUUAGAGGCUAACG

skip 27-ex 61–80

UGCACUGAAGUCACGGUGUG

skip 27-ex 88–107

UUCAUAUUUGCCAUCUUCUU

skip 27-ex 6–25 scram

CUGUUUGUUUCUGACGCUUU

skip 27-ex 31–50 scram

CCAUGGGUCUUUUAGUAAAG

skip 27-ex 61–80 scram

UGGACAUCGCAGACGUUGGU

skip 27-ex 88–107 scram

GUUCUCUUUUUCAUUCCAUA

FLuc A1

GUCUGCUCGAAGCGGCCGGCucgaguaugauagggacuuagggug