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Table 1 Primers used for RT-PCR analysis of Enah transcripts with or without exons 3a, 3b, 6L and/or 11a.

From: Identification and expression analysis of splice variants of mouse enabled homologue during development and in adult tissues

Transcript with (+) or without (-) alternative exons:

Primer namea

Sequence

+ 3a and + 3b

Fw 3a_3b

5'-GCGATGTATTTTCTGTGTGTTC-3'

+ 3a and - 3b

Fw 3a_4

5'-GCGATGTATTTTCTGTGGGC-3'

- 3a and + 3b

Fw 3_3b:

5'-ATTCACAGGAAGCAGTGTTC-3'

- 3a and - 3b

Fw 3_4

5'-TTCACAGGAAGCAGGGC-3'

+ 6L

Rev 6L_5

5'-GTCTGAAGATGGAGCAGC-3'

 

Rev 7_6

5'-GTCCCAAGACAAGGCCC-3'

 

Fw 6L_6

5'-TTCTCCCTCTGCAGCTGC-3'

-6L

Rev 7_6

5'-GTCCCAAGACAAGGCCC-3'

 

Fw 5_6

5'-AGAATGTCCAATGCTGCTG-3'

+11a

Rev 12_11a

5'-GTGTGGATTTGGGTCTGTG-3'

-11a

Rev 12_11

5'-TGTGGATTTGGGTCTGGAG-3'

  1. aFormat of primer name: direction (Fw = forward or Rev = reverse) followed by the numbers of the exon that form the exon boundary on which the primer is located.