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Table 4 Location-associated lncRNAs and corresponding protein-coding genes

From: Analyses of changes in myocardial long non-coding RNA and mRNA profiles after severe hemorrhagic shock and resuscitation via RNA sequencing in a rat model

Gene Position IRI RPKM Sham RPKM Fold change Regu-lation Gene Position IRI RPKM Sham RPKM Fold change Regulation
NONRATT006032.2 chr10:88791856-88796598 7.831 1.444 5.424 Up Stat3 chr10:88790406-88842233 273.503 58.99 4.667 Up
NONRATT006033.2 chr10:88792525-88797203 3.650 0.685 5.328 Up
NONRATT006034.2 chr10:88793064-88796762 26.141 3.089 8.463 Up
NONRATT006035.2 chr10:88809397-88810399 5.958 2.053 2.902 Up
NONRATT009101.2 chr13:105055964-105056435 5.069 0.735 6.894 Up Tgfb2 chr13:105041053-105140780 6.410 3.680 1.742 Up
NONRATT009102.2 chr13:105137574-105138070 4.744 0.698 6.794 Up
NONRATT011994.2 chr16:50029795-50031018 4.221 1.928 2.189 Up Tlr3 chr16:50016857-50030314 14.447 6.461 2.236 Up
NONRATT020804.2 chr4:146777105-146777750 3.006 13.001 0.231 Down Atg7 chr4:146598416-146776407 9.284 7.338 1.265 Up
NONRATT021717.2 chr4:146778556-146779157 4.377 12.106 0.362 Down
NONRATT026198.2 chr7:126685426-126687282 19.157 51.507 0.372 Down Ppara chr7:126619196-126681752 20.588 65.117 0.316 Down
NONRATT029969.2 chr9:47035533-47036225 119.680 31.350 3.818 Up Il1r1 chr9:46997798-47035275 68.896 31.162 2.211 Up
NONRATT029995.2 chr9:54304608-54308682 8.083 0.973 8.310 Up Stat1 chr9:54287540-54327958 124.250 67.559 1.839 Up
  1. IRI ischemia–reperfusion injury