From: Messenger RNA profile analysis deciphers new Esrrb responsive genes in prostate cancer cells
Term (down-regulated genes) | Count | P value |
---|---|---|
GO:0042273Â ~Â ribosomal large subunit biogenesis | 4 | 0.007 |
GO:0006297Â ~Â nucleotide-excision repair, DNA gap filling | 4 | 0.032 |
GO:0006541Â ~Â glutamine metabolic process | 4 | 0.042 |
GO:0009083Â ~Â branched chain family amino acid catabolic process | 5 | 0.001 |
GO:0042274Â ~Â ribosomal small subunit biogenesis | 5 | 0.001 |
GO:0009081Â ~Â branched chain family amino acid metabolic process | 5 | 0.004 |
GO:0006904Â ~Â vesicle docking during exocytosis | 5 | 0.016 |
GO:0048278Â ~Â vesicle docking | 5 | 0.021 |
GO:0006958Â ~Â complement activation, classical pathway | 5 | 0.031 |
GO:0022406Â ~Â membrane docking | 5 | 0.038 |
GO:0002455Â ~Â humoral immune response mediated by circulating immunoglobulin | 6 | 0.008 |
GO:0009060Â ~Â aerobic respiration | 6 | 0.014 |
GO:0006635Â ~Â fatty acid beta-oxidation | 7 | 0.001 |
GO:0009062Â ~Â fatty acid catabolic process | 7 | 0.003 |
GO:0019395Â ~Â fatty acid oxidation | 7 | 0.005 |
GO:0034440Â ~Â lipid oxidation | 7 | 0.005 |
GO:0033559Â ~Â unsaturated fatty acid metabolic process | 7 | 0.019 |
GO:0009064Â ~Â glutamine family amino acid metabolic process | 7 | 0.020 |
GO:0019228Â ~Â regulation of action potential in neuron | 7 | 0.024 |
GO:0006289Â ~Â nucleotide-excision repair | 7 | 0.026 |
GO:0051591Â ~Â response to cAMP to cAMP | 8 | 0.002 |
GO:0006800Â ~Â oxygen and reactive oxygen species metabolic process | 8 | 0.021 |
GO:0001508Â ~Â regulation of action potential | 8 | 0.023 |
GO:0009566Â ~Â fertilization | 8 | 0.046 |
GO:0044242Â ~Â cellular lipid catabolic process | 9 | 0.013 |
GO:0007160 ~ cell–matrix adhesion | 9 | 0.032 |
GO:0060627Â ~Â regulation of vesicle-mediated transport | 9 | 0.046 |
GO:0009063Â ~Â cellular amino acid catabolic process | 10 | 0.002 |
GO:0045333Â ~Â cellular respiration | 10 | 0.020 |
GO:0007568Â ~Â aging | 10 | 0.040 |
GO:0016485Â ~Â protein processing | 10 | 0.044 |
GO:0006364Â ~Â rRNA processing | 11 | 0.005 |
GO:0016072Â ~Â rRNA metabolic process | 11 | 0.007 |
GO:0006887Â ~Â exocytosis | 11 | 0.022 |
GO:0009310Â ~Â amine catabolic process | 12 | 0.000 |
GO:0008203Â ~Â cholesterol metabolic process | 12 | 0.001 |
GO:0016125Â ~Â sterol metabolic process | 12 | 0.003 |
GO:0042391Â ~Â regulation of membrane potential | 12 | 0.024 |
GO:0015980Â ~Â energy derivation by oxidation of organic compounds | 12 | 0.038 |
GO:0042254Â ~Â ribosome biogenesis | 13 | 0.005 |
GO:0016053Â ~Â organic acid biosynthetic process | 14 | 0.013 |
GO:0046394Â ~Â carboxylic acid biosynthetic process | 14 | 0.013 |
GO:0022613Â ~Â ribonucleoprotein complex biogenesis | 14 | 0.038 |
GO:0016042Â ~Â lipid catabolic process | 15 | 0.013 |
GO:0006457Â ~Â protein folding | 15 | 0.016 |
GO:0034470Â ~Â ncRNA processing | 15 | 0.025 |
GO:0022900Â ~Â electron transport chain | 16 | 0.000 |
GO:0032940Â ~Â secretion by cell | 16 | 0.026 |
GO:0016054Â ~Â organic acid catabolic process | 17 | 0.000 |
GO:0046395Â ~Â carboxylic acid catabolic process | 17 | 0.000 |
GO:0034660Â ~Â ncRNA metabolic process | 19 | 0.008 |
GO:0006631Â ~Â fatty acid metabolic process | 21 | 0.000 |
GO:0046903Â ~Â secretion | 22 | 0.014 |
GO:0006414Â ~Â translational elongation | 25 | 0.000 |
GO:0008610Â ~Â lipid biosynthetic process | 26 | 0.002 |
GO:0006091Â ~Â generation of precursor metabolites and energy | 31 | 0.000 |
GO:0006412Â ~Â translation | 38 | 0.000 |
GO:0016192Â ~Â vesicle-mediated transport | 39 | 0.003 |
GO:0055114Â ~Â oxidation reduction | 54 | 0.000 |
Term (up-regulated genes) | Count | P value |
---|---|---|
GO:0002220Â ~Â innate immune response activating cell surface receptor signaling pathway | 2 | 0.045 |
GO:0048712Â ~Â negative regulation of astrocyte differentiation | 2 | 0.045 |
GO:0000724Â ~Â double-strand break repair via homologous recombination | 3 | 0.020 |
GO:0000725Â ~Â recombinational repair | 3 | 0.020 |
GO:0045987Â ~Â positive regulation of smooth muscle contraction | 4 | 0.001 |
GO:0045933Â ~Â positive regulation of muscle contraction | 4 | 0.002 |
GO:0006940Â ~Â regulation of smooth muscle contraction | 4 | 0.009 |
GO:0050768Â ~Â negative regulation of neurogenesis | 4 | 0.015 |
GO:0010721Â ~Â negative regulation of cell development | 4 | 0.018 |
GO:0006937Â ~Â regulation of muscle contraction | 4 | 0.050 |
GO:0048704Â ~Â embryonic skeletal system morphogenesis | 5 | 0.004 |
GO:0048706Â ~Â embryonic skeletal system development | 5 | 0.012 |
GO:0031344Â ~Â regulation of cell projection organization | 5 | 0.019 |
GO:0007411Â ~Â axon guidance | 5 | 0.035 |
GO:0051258Â ~Â protein polymerization | 6 | 0.000 |
GO:0043623Â ~Â cellular protein complex assembly | 6 | 0.039 |
GO:0050767Â ~Â regulation of neurogenesis | 6 | 0.042 |
GO:0048705Â ~Â skeletal system morphogenesis | 7 | 0.002 |
GO:0060284Â ~Â regulation of cell development | 7 | 0.031 |
GO:0007018Â ~Â microtubule-based movement | 8 | 0.000 |
GO:0051960Â ~Â regulation of nervous system development | 8 | 0.007 |
GO:0006916Â ~Â anti-apoptosis | 8 | 0.010 |
GO:0007017Â ~Â microtubule-based process | 8 | 0.027 |
GO:0001501Â ~Â skeletal system development | 9 | 0.031 |
GO:0006917Â ~Â induction of apoptosis | 9 | 0.031 |
GO:0012502Â ~Â induction of programmed cell death | 9 | 0.032 |
GO:0045596Â ~Â negative regulation of cell differentiation | 10 | 0.001 |
GO:0040008Â ~Â regulation of growth | 10 | 0.017 |
GO:0043066Â ~Â negative regulation of apoptosis | 10 | 0.021 |
GO:0043069Â ~Â negative regulation of programmed cell death | 10 | 0.023 |
GO:0060548Â ~Â negative regulation of cell death | 10 | 0.023 |
GO:0022403Â ~Â cell cycle phase | 10 | 0.049 |
GO:0006928Â ~Â cell motion | 12 | 0.021 |
GO:0042127Â ~Â regulation of cell proliferation | 17 | 0.018 |
GO:0042981Â ~Â regulation of apoptosis | 18 | 0.011 |
GO:0043067Â ~Â regulation of programmed cell death | 18 | 0.012 |
GO:0010941Â ~Â regulation of cell death | 18 | 0.012 |
GO:0006355Â ~Â regulation of transcription, DNA-dependent | 29 | 0.047 |
GO:0051252Â ~Â regulation of RNA metabolic process | 30 | 0.038 |
GO:0006350Â ~Â transcription | 43 | 0.000 |
GO:0045449Â ~Â regulation of transcription | 48 | 0.001 |