Statistical modelling of transcript profiles of differentially regulated genes

BMC Molecular Biology

Table 1 Critical exponential curve models for the transcription patterns of the 5 genes during long-term A. bisporus fruitbody post-harvest storage.

	Fitted parameters			Derived descriptors
	A	B	C	A+B	-B/C	Time of maximum response (days)	Maximum response
CBP	1.886	-3.426	7.801	-1.540	0.439	1.814	1.753
CYP II	-2.572	-1.500	7.350	-4.072	0.204	1.579	0.633
GHYD	0.348	-3.049	2.125	-2.701	1.435	2.810	0.727
GSYN	-3.592	1.473	11.350	-2.119	-0.130	1.245	2.717
RAFE	-0.423	-1.896	2.585	-2.319	0.733	2.108	0.344

Fitted parameters for five genes (CBP = cruciform DNA-binding protein, CYP II = cytochrome P450II, GHYD = glucuronyl hydrolase, GSYN = β (1–6) glucan synthase, and RAFE = riboflavin aldehyde-forming enzyme) with parameter R constrained to be common across all five genes (R = 0.4832 (s.e. = 0.0288)). Additional descriptors of response shape derived from the fitted parameters.

ISSN: 1471-2199