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Table 6 Summary of the numbers of reads from stress-treated small RNA libraries obtained by 454 sequencing

From: Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis

Small RNA libraries Abio 1 Abio 2 Abio 3 Abio 4 Bio 1 Bio 2
Small RNA reads (>= 18) 21203 26246 17824 12465 33289 37599
Unique reads (duplicates removed) 13542 15221 11262 8325 15774 26806
Match genomic DNAs 5431 5882 4514 4198 6236 9613
Match genes + introns + UTR 2917 3183 2444 2102 3933 5914
Match genes - introns + UTR 2814 3063 2357 2038 3873 5667
Matching NAT genes 30 22 19 19 17 24
  1. Abiotic stress-treated libraries
  2. Abio1: Cold treatment, 4°C
  3. Abio2: Draught-treatment and ABA treatment
  4. Abio3: Salt treatment and copper treatment
  5. Abio4: UV treatment and heat treatment
  6. Bio1: Pseudomonas syringae DC3000, and DC3000 (avrRpt2) infection
  7. Bio2: A.b., and B. c. infection