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Table 1 Comparison of E. histolytica, H. sapiens and S. cerevisiae RAD52 epistasis group proteins

From: Transcriptional profile of the homologous recombination machinery and characterization of the EhRAD51 recombinase in response to DNA damage in Entamoeba histolytica

Entamoeba histolytica

Homo sapiens

Saccharomyces cerevisiae

Predicted protein

Size (aa)

GeneBank ID

Locus name a

Protein

Accession number b

Size (aa)

e-value

H (%)

I (%)

Protein

Accession number b

Size (aa)

e-value

H (%)

I (%)

EhMRE11

596

XM_651393

EHI_125910

MRE11

P49959

708

3e-49

51

32

MRE11

P32829

692

1e-33

45

26

EhMRE11-like

223

XM_644963

EHI_077650

MRE11

P49959

708

3e-23

51

25

MRE11

P32829

692

2e-20

49

27

EhRAD50

1241

XM_647783

EHI_079960

RAD50

Q92878

1312

2e-44

40

23

RAD50

P12753

1312

2e-43

46

27

EhNBS1

764

XM_647447

EHI_098770

NBS1

Q6IQ31

754

0.0022

40

24

XRS2

P33301

854

e+3

28

17

EhRAD51

367

XM_648984

EHI_031220

RAD51

Q06609

339

e-125

83

71

RAD51

P25454

400

2e-43

78

60

EhRAD51C

284

XM_619126

EHI_122860

RAD51C

Q433502

376

3e-17

51

28

RAD57

P25301

460

e-109

47

27

-

-

-

 

RAD51B

O15315

350

-

-

-

RAD55

P38953

406

-

-

-

-

-

-

 

RAD51D

O75771

289

-

-

-

-

-

-

-

-

-

-

-

-

 

XRCC2

O43543

280

-

-

-

-

-

-

-

-

-

-

-

-

 

XRCC3

O43542

346

-

-

-

-

-

-

 

-

-

EhRAD52

243

XM_648599

EHI_188230

RAD52

P43351

418

2e-35

71

48

RAD52

P06778

504

1e-23

57

38

EhRAD54

885

XM_648260

EHI_103840

RAD54

Q92698

747

e-115

58

41

RAD54

P32863

898

e-106

56

37

EhRAD54B

765

XM_645236

EHI_114930

RAD54B

Q9Y620

910

e-130

52

36

RDH54

P32863

920

e-114

55

39

EhRAD59 (EhRAD52/22a)

190

XM_651011

EHI_112840

-

-

-

-

-

-

RAD59

Q12223

238

2e-08

45

25

  1. a E. histolytica Pathema datatabase
  2. b Swiss-Prot/TrEMBL databases
  3. I, identity; H, homology