Skip to main content

Table 5 Common mRNA targets bearing the cis-elements UBP1m and RBP3m included in experimental and database lists.

From: Functionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes

Systematic name or TIGR identifier

Description

Tc00.1047053506811.120

Hypothetical protein 1 (HYPO1)

UP|Q9NIQ8 (Q9NIQ8)

Mucin-like protein

UP|Q72DX6 (Q72DX6)

Sensor histidine kinase

UP|Q25325 (Q25325)

Heat shock protein 70-related protein

UP|Q7TPK7 (Q7TPK7)

Ac2-048

UP|Q9XY95 (Q9XY95)

Neurotrophin

UP|H2A_TRYCR (P35066)

Histone H2A

UP|RL29_DROME (Q24154)

60S ribosomal protein L29 (L43)

UP|RS6_LEIMA (Q9NE83)

40S ribosomal protein S6

PDB|1II2_A.0|17942708|

1II2_A Chain A, Crystal Structure Of Phosphoenolpyruvate Carboxykinase (Pepck)

UP|O48239 (O48239)

Cytochrome b (Fragment)

gb|L22334.1|TRBS3RRBN

5.8S ribosomal RNA, internal transcribed spacers 1ā€“7, and 28S ribosomal RNA