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Figure 6 | BMC Molecular Biology

Figure 6

From: Functionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes

Figure 6

Classification of mRNAs interacting with proteins and validation of database targets. A) New and potential targets were found by searching databases for mRNA harbouring UBP1m or RBP3m. Column charts show a functional classification of gene products encoded by experimental and potential targets. B) Secondary structures of representative examples of motifs and validation of database targets by RT-PCR in the IP material. PROT, 29 KDa Proteasome subunit TCPR29; PARB1, Paraflagellar rod component 1; RpS8, Ribosomal protein S8; MTP, Membrane transporter protein.

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