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Table 1 Nonsense mutations sequenced in the present work

From: Inactivation of NMD increases viability of sup45 nonsense mutants in Saccharomyces cerevisiae

Mutant allele

Nucleotide substitution

Putative destabilizing motifa

 

Position/ORF size

Codon changeb

 

his7-1

229/1659

A AA→T AA

311ca TTGAT t TT a agttgtccaggt TCGATG a TTC a

lys9-A21

605/1341

TT A→TA A

ND

trp1-289

403/678

C AG→T AG

436gtTTGAT t C agaagcaggtgggacaggtgaactT t T g GAT tggaacTCGAT t TCT gactgggttggaagg

  1. a The downstream sequences were searched for the presence of DSE (TGYYGATGYYYYY) [15]. The numbers above the sequences indicate the 5' boundaries of putative DSE (underlined sequences) in the corresponding open reading frame (ORF); ND – not detected. b Codon changes in the case of each mutation are shown, nucleotide changes are underlined.