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Table 3 TaqMan primers and probes used in this study

From: Alternative splicing of human peroxisome proliferator-activated receptor delta (PPARdelta):effects on translation efficiency and trans-activation ability

Name

Target

Sequence (5'-3')

Forward primers

  

   TQEx2Fw

exon 2

5'-GCTCACCAACAGATGAAGAC

   TQEx2cFw

exon 2c

5'-CCTCCTTGGAGACCAGCTA

   TQEx8Fw

exon 8

5'-GACCTGGCCCTATTCATTG

Reverse primers

  

   TQEx2aRev

exon 2a

5'-GCATTGTTCAGACTCTTGGT

   TQEx2eRev

exon 2e

5'-CAGGGAAGGTTCAAGGTCAA

   TQEx3Rev

exon 3

5'-GTATCTGACCCTGCTTTCCA

   TQEx4Rev

exon 4

5'-TCTGAACGCAGATGGACCT

   TQEx9Rev

exon 9

5'-ACCCGTGGAACGTTCATGA

Probes

  

   Ex2:2aPr

Exons 2:2a

5'-FAM-ACCTCCTACCCCTCGTTGGTG-TAMRA

   Ex2:2ePr

Exons 2:2e

5'-FAM-CACCAACGAGATTATCTTGAAGAC-TAMRA

   Ex2c:3Pr

Exons 2c:3

5'-FAM-CATTCCAGACCCTCACATAAGGA-TAMRA

   Ex2:4Pr

Exons 2:4

5'-FAM-TCCCATCAGCCTCGTTGGTGC-TAMRA

   Ex8:9Pr

Exons 8:9

5'-FAM-CTGGCCGGTCTCCACACAGAA-TAMRA

  1. The primers and probes are annotated according to the target exons and exon/exon junctions in the human PPARδ gene, respectively.