Table 1 DG genes details based on genomic DNA sequences available at the Ensembl databank
From: Duplication of the dystroglycan gene in most branches of teleost fish
| Â | Â | Â | Â | gene structure exon/intron (bp) | Â | Â | ||||
|---|---|---|---|---|---|---|---|---|---|---|
SPECIES | GENE | ID ENSEMBL | GENOME LOCATION | exon1 | intron1 | exon2 | mini-intron | exon3 | total length (bp) | precursor (aa) |
H. sapiens | DAG1 | ENSG00000173402 | chromosome 3 | 285 | 19977 | 2403 | no | no | 22665 | 895 |
M. musculus | DAG1 | ENSMUSG00000039952 | chromosome 9 | 279 | 8351 | 2403 | no | no | 11033 | 893 |
D. rerio | DAG1 | ENSDARG00000016153 | chromosome 22 | 321 | 15186 | 2280 | no | no | 17787 | 866 |
T. rubripes | DAG1a | NEWSINFRUG00000153220 | scaffold 2682 | 336 | 2938 | 435 | 137 | > 1689 | > 5674 | > 820 |
T. rubripes | DAG1b | NEWSSINFRUG00000136139 | scaffold 75 | 366 | 818 | 2307 | no | no | 3491 | 890 |
T. nigroviridis | DAG1a | GSTEN00009405001 | scaffold SCAF11228 | ? | > 606 | 441 | 137 | 1857 | > 3041 | > 765 |
T. nigroviridis | DAG1b | GSTENG00033210001 | scaffold SCAF15033 | 369 | 779 | 2313 | no | no | 3461 | 893 |
O. latipes | DAG1a | ENSORLG00000010935 | chromosome 5 | 297 | 22628 | 459 | 86 | 1818 | 25288 | 857 |
O. latipes | DAG1b | ENSORLG00000009878 | chromosome 7 | 312 | 839 | 2283 | no | no | 3434 | 864 |
G. aculeatus | DAG1a | ENSGACG00000003062 | group XVII 379.49 k | ? | ? | 462 | 116 | 1827 | > 2405 | > 762 |
G. aculeatus | DAG1b | ENSGACG00000002661 | group XII 444.80 k | 312 | 1026 | 2301 | no | no | 3639 | 870 |
D. labrax | DAG1a | NCBI accession code DQ149510 | ? | ? | ? | > 90 | 116 | > 1783 | > 1989 | > 624 |