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Figure 2 | BMC Molecular Biology

Figure 2

From: Distinctive expression patterns of 185/333 genes in the purple sea urchin, Strongylocentrotus purpuratus: an unexpectedly diverse family of transcripts in response to LPS, β-1,3-glucan, and dsRNA

Figure 2

Element patterns identified from sequences of the 185/333 amplicons. The element patterns (defined in [31]) for all of the clones isolated from this study are represented in graphical form. Different elements are shown as differently colored circles and ovals. Gaps are shown as horizontal lines. Short vertical black lines indicate the position of a stop codon and cDNAs with an early stop codon are designated by a decimal point followed by an integer. Elements with a diamond indicate the locations of indels that lead to a frame shift and missense amino acid sequence (elements with horizontal stripes). The sequences located 3' of the stop codon are shown to indicate that the remainder of the transcript sequence is present even though it may not be translated (vertical stripes). The frequency with which each pattern was identified (#) and the antigen that induced the pattern (Antigen) are indicated; L: LPS; β: Lam; R: dsRNA; a: aCF; *: whole bacterial challenge as identified in [31].

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BMC Molecular Biology

ISSN: 1471-2199

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