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Table 1 Duplicated genes with multiple TE exonization

From: Biased exonization of transposed elements in duplicated genes: A lesson from the TIF-IA gene

No. of exons TE Gene Accession Description Dup. gene Dup. accession Dup. description
3 AluSx AluJo MER5A SRPN NM_022807 small nuclear ribonucleo-protein polypeptide N SNRPB BC003530 small nuclear ribonucleo-protein polypeptides B and B1
2 AluSx AluJb NCF1 pseudo-gene BC002816 neutrophil cytosolic factor 1 pseudo-gene NCF1 NM_000265 neutrophil cytosolic factor 1
2 AluSx AluJb YY1AP1 BC025272 YY1 associated protein GON4L BX648802 gon-4-like protein
2 AluSp MIR NSUN5C NM_148936 NOL1/NOP2/Sun domain family member 5C NSUN5 NM_018044 NOL1/NOP2/Sun domain family, member 5
2 AluY AluJb RAP1A NM_001010935 RAP1A, member of RAS oncogene family RAP1B NM_015646 RAP1B, member of RAS oncogene family
2 AluSx MSTA POLR2J2 BC086857 RPB11b1beta protein (DNA directed RNA polymerase II polypeptide J-related) POLR2J2 NM_032958 DNA directed RNA polymerase II polypeptide
2 AluSg/x AluJb ZNF611 NM_030972 zinc finger protein 611 ZNF701 NM_018260 zinc finger protein 701
2 AluSq AluSp ZNF702 NM_024924 zinc finger protein 702 ZNF137 NM_003438 zinc finger protein 137
3 MSTA MSTA MSTA PMS2L14 AB017005 PMS2L14 protein. PMS2 NM_000533 PMS2 postmeiotic segregation increased 2 isoform
2 AluJb AluY ZNF283 AK098175 zinc finger protein 283 ZNF420 NM_144689 zinc finger protein 420
2 AluJo L1MA9 ZNF678 NM_178549 zinc finger protein 678 ZNF479 AF277624 zinc finger protein 479
2 AluSx LTR49 PILRB NM_013440 paired immunoglobulin-like type 2 receptor beta PVRIG NM_024070 poliovirus receptor related immunoglobulin