Skip to main content

Table 3 Pairwise primary sequence identity (%) between crenarchaeal ATP-dependent DNA ligases and that of the eubacterium Aquifex aeolicus.

From: Biochemical characterisation of LigN, an NAD+-dependent DNA ligase from the halophilic euryarchaeon Haloferax volcanii that displays maximal in vitro activity at high salt concentrations

 

Aam

Ssh

Ape

Pae

Aae

74A4

Aam

100

74.8

59.3

49.0

50.8

42.4

Ssh

74.8

100

59.1

48.1

49.4

42.4

Ape

59.3

59.1

100

50.8

48.1

41.0

Pae

49.0

48.1

50.8

100

47.5

44.3

Aae

50.8

49.4

48.1

47.5

100

42.9

74A4

42.4

42.4

41.0

44.3

42.9

100

  1. Abbreviations: Aam (Acidianus ambivalens, formerly Desulfurolobus ambivalens), Ssh (Sulfolobus shibatae),Ape (Aeropyrum pernix), Pae (Pyrobaculum aerophilum), Aae (Aquifex aeolicus), and 74A4 (uncultured marine crenarchaeon 74A4). Sequence identities were calculated using default settings with the SIM alignment tool [41].