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Table 3 Nucleotide combinations that correlate with lack of reporter gene activation

From: Flexible promoter architecture requirements for coactivator recruitment

Size

Sequence combination

Sensitivity

Specificity

12

R5-G9

6/6 (100%)

6/7 (86%)

12

K6-T9

8/9 (89%)

8/9 (89%)

20

W8-G17

5/8 (62%)

5/5 (100%)

20

A11-T17

5/5 (100%)

5/6 (83%)

  1. IUPAC symbols: R = A or G; K = A or C; W = A or T.