Table 2 Promoter sequences associated with reporter gene activation
From: Flexible promoter architecture requirements for coactivator recruitment
Clone | Growth rate | Intervening sequence |
|---|---|---|
5 | - | TGGGTT |
8 | - | GAGGCG |
20 | - | GAGCAT |
22 | - | TGGATG |
30 | - | GTGAGT |
32 | - | AAAGAG |
33 | - | GTGACT |
35 | - | TGGTGT |
36 | - | AGAATG |
44 | - | TGCACT |
47 | - | AATTGG |
48 | - | AAACTC |
3 | + | TAAGAG |
6 | + | CATAGT |
19 | + | CGGTCC |
25 | + | GTTAAT |
42 | + | CGTCGT |
2 | ++ | CGCGTT |
4 | ++ | AACCGC |
7 | ++ | TGAGGC |
27 | ++ | CAAACG |
43 | ++ | CCATGG |
46 | ++ | GGTTGT |
18 | +++ | ATTGGC |
23 | +++ | AGGCAA |
29 | +++ | ATATAT |
31 | +++ | AAATGA |
34 | +++ | TTGTGA |
Clone | Growth rate | Intervening sequence |
2 | - | GAGTCTGATGGTCT |
7 | - | TGGGTTGTCAACGG |
23 | - | GGGCAATCGCGATG |
28 | - | CGTGGGGTGCTTAG |
31 | - | TATAAGGCGTTGGG |
47 | - | CGAGGGGAAAACAG |
48 | - | TGAGGAGATGAAGT |
68 | - | GAAGTGAGGAGCGG |
69 | - | AAGAATTACCCGGT |
3 | + | CCTGATGCCTACAG |
16 | + | CAAGGCTAGGAGCG |
24 | + | GCGCAGGATCGGCT |
67 | + | GGGTGTGAAGGGCT |
9 | ++ | TGAGCTCTTGACAT |
14 | ++ | GGTTCAACGTTACT |
30 | ++ | GCAAGGAGCGAGGG |
32 | ++ | AGGGGAACGGAGAG |
33 | ++ | TAGTGGGATTTGCG |
34 | ++ | GGTGACTAGGCCTC |
46 | ++ | GAAGTGGATTGCGT |
5 | +++ | GGACGTAATTTCAA |
8 | +++ | TTTACAAACTAGGG |
10 | +++ | CGATGTACTGCCAA |
11 | +++ | GTTTGTTGGGATGG |
12 | +++ | GGCATTTATGGGAA |
13 | +++ | CCCTTCCTGTGGGC |
15 | +++ | GGTGGTTCATGGGA |
18 | +++ | CGCGCGGGCGTCTT |
25 | +++ | TCAGGGTTCAGCCA |
26 | +++ | CGCGCCGAACGGGC |
27 | +++ | TAGTGTCGGGGGCG |
29 | +++ | GTGGTAGACGCTGC |
35 | +++ | TTATGGTACCACCA |
36 | +++ | TCATGCGTCGTACG |
37 | +++ | TTGCTGGCAAGGAT |
38 | +++ | AAAAGAGGAGATTC |
39 | +++ | ATGTCGTCATGTGT |
40 | +++ | AATGGCATGCTGCG |
41 | +++ | AGAGGCAGTATCAA |
43 | +++ | GTTTGGGTCCGGGC |
72 | +++ | GGCATTTATGGGAA |