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Table 1 MicroRNA expression profiling in TIA-depleted HeLa cells

From: Identification of a set of miRNAs differentially expressed in transiently TIA-depleted HeLa cells by genome-wide profiling

Fold change pval (LiMMA) FDR (LiMMA) miRNA ID miRNA ID update
2.21 4.13E-06 8.26E-05 hsa-miR-197_MM2 hsa-miR-197-3p
3.84 5.00E-07 1.70E-05 hsa-miR-210 -
2.3 4.84E-06 9.38E-05 hsa-miR-373* hsa-miR-373-5p
2.75 3.78E-06 7.77E-05 hsa-miR-492 -
2.79 1.38E-06 3.55E-05 hsa-miR-498 -
2.5 5.22E-06 9.89E-05 hsa-miR-503 hsa-miR-503-5p
4.29 1.00E-07 4.05E-06 hsa-miR-572 -
3.78 3.60E-07 1.27E-05 hsa-miR-586 -
2.24 5.01E-06 9.59E-05 hsa-miR-612 -
2.82 4.50E-06 8.81E-05 hsa-miR-615 hsa-miR-615-3p
3.18 1.91E-06 4.50E-05 hsa-miR-623 -
2.84 1.23E-06 3.31E-05 hsa-miR-625 hsa-miR-625-5p
2.11 3.63E-06 7.54E-05 hsa-miR-638 -
2.44 1.64E-06 3.96E-05 hsa-miR-658 -
3.61 2.57E-06 5.63E-05 hsa-miR-663 hsa-miR-663a
2.23 2.75E-06 5.96E-05 hsa-miR-671 hsa-miR-671-5p
3.65 3.18E-06 6.70E-05 hsa-miR-769-3p -
3.44 2.60E-07 9.88E-06 miRPlus_17832 n.d.
2.73 9.60E-07 2.77E-05 miRPlus_17836 hsa-miR-30b-3p
4.38 5.70E-07 1.91E-05 miRPlus_17856 n.d.
3.34 2.26E-06 5.13E-05 miRPlus_17864 hsa-miR-744-5p
2.5 2.91E-06 6.23E-05 miRPlus_17867 hsa-miR-203a
2.7 6.30E-07 2.04E-05 miRPlus_17877/17960 hsa-miR-483-5p
2.33 4.69E-06 9.13E-05 miRPlus_17878 hsa-miR-193a-5p
2.84 1.87E-06 4.43E-05 miRPlus_17881 n.d.
3.63 5.50E-07 1.85E-05 miRPlus_17890 n.d.
3.3 2.16E-06 4.94E-05 miRPlus_17942 hsa-miR-125a-3p
2.15 2.85E-06 6.14E-05 miRPlus_17950 hsa-miR-371-5p
2.6 1.34E-06 3.45E-05 miRPlus_17961 hsa-miR-629-5p
  1. miRNA cluster defining a signature of up-regulated miRNAs in TIA-depleted HeLa cells. The microarray data were analyzed by the limma R method. Fold is an average measure of the fold change in differential expression and the false discovery rate (FDR) indicates the expected percentage of false positives (FDR < 0.0001). miRNA ID update are miRNAs and miRPlus renamed in agreement with miRBase 18 database. n.d. means non-determined.