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Figure 8 | BMC Molecular Biology

Figure 8

From: A cDNA microarray, UniShrimpChip, for identification of genes relevant to testicular development in the black tiger shrimp (Penaeus monodon)

Figure 8

A bootstrapped neighbor-joining tree illustrating relationships between CSN5 of various taxa. Amino acid sequences of different isoforms of CSN5 from Canis familiaris (CfCSN5-1, XP_535093; CfCSN5-3, XP_859089; CfCSN5-4, XP_859121; CfCSN5-5, XP_859165), Caenorhabditis elegans (CeCSN5, P91001), Danio rerio (DrCSN5, NP_957019), Xenopus (Silurana) tropicalis (XtCSN5, NP_989109), Xenopus laevis (XlCSN5, NP_001086291), Rattus norvegicus (RnCSN5, NP_001020866), Sus scrofa (SscCSN5, NP_001098770), Salmo salar (SsaCSN5, ACH70627), Oncorhynchus mykiss (OmCSN5, NP_001158520), Acyrthosiphon pisum (ApCSN5, NP_001156462), Gallus gallus (GgCSN5, NP_001034400), Osmerus mordax (OmCSN5, ACO09632), Oryctolagus cuniculus (OcCSN5, XP_002710500), Homo sapiens (HsCSN5a, EAW86931), Mus musculus (MmusCSN5a, EDL14298; MmusCSN5b, EDL14299), Culex quinquefasciatus (CqCSN5, XP_001862398), Ciona intestinalis (CiCSN5, XP_002129245), Bos Taurus (BtCSN5-1, XP_583747), Equus caballus (EcCSN5, XP_001494265), Ornithorhynchus anatinus (OaCSN5, XP_001512862), Monodelphis domestica (MdCSN5, XP_001368118), Strongylocentrotus purpuratus (SpCSN5, XP_001190460), Pan troglodytes (PtCSN5-1, XP_001148926; PtCSN5-2, XP_001148995; PtCSN5-3, XP_001149144; PtCSN5-4, XP_522159; PtCSN5-5, XP_001162598; PtCSN5-6, XP_001162682; PtCSN5-7, XP_001162723), Apis mellifera (AmCSN5-1, XP_623806; AmCSN5-2, XP_623836), Macaca mulatta (MmulCSN5-1, XP_001097450; MmulCSN5-2, XP_001097549; MmulCSN5-3, XP_001097650; MmulCSN5-4, XP_001097759; MmulCSN5-5, XP_001097856; MmulCSN5-6, XP_001098042), Arabidopsis thaliana (AtCSN5a, Q9FVU9; AtCSN5b, Q8LAZ7), Bombyx mori (BmCSN5, NP_001138802), Tribolium castaneum (TcCSN5, XP_972769), Nasonia vitripennis (NvCSN5, XP_001599567), Pediculus humanus corporis (PhCSN5, XP_002422812), Aedes aegypti (AaCSN5, XP_001649479), Glossina morsitans morsitans (GmCSN5, ADD19140), Drosophila melanogaster (DmeCSN5, Q9XZ58), Drosophila mojavensis (DmoCSN5, XP_001998673), Drosophila grimshawi (DgCSN5, XP_001990340), Drosophila virilis (DvCSN5, XP_002056387), Drosophila simulans (DsCSN5, XP_002103175), Drosophila ananassae (DaCSN5, XP_001954897) Drosophila yakuba (DyCSN5, XP_002097599), Drosophila erecta (DeCSN5, XP_001980192), Drosophila willistoni (DwCSN5, XP_002074130), Drosophila sechellia (DsCSN5, EDW44858), Sumatran orangutan (SoCSN5, XP_002819198), Ixodes scapularis (IsCSN5, XP_002408598)and Oryza sativa Japonica Group(OsCSN5, NP_001054112) were retrieved from the GenBank and compared with that of Penaeus monodon (PmCSN5).

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