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Table 1 Tested miRNAs and predicted target

From: Overexpression of miR-128 specifically inhibits the truncated isoform of NTRK3 and upregulates BCL2 in SH-SY5Y neuroblastoma cells

miRNA

FL-NTRK3

TR-NTRK3

hsa-let-7b†

 

M(1), T(1)

hsa-let-7e†

M(1)

 

hsa-miR-1

NP

NP

hsa-miR-9#

 

T(1)

hsa-miR-10a

NP

NP

hsa-miR-15a

NP

NP

hsa-miR-16

NP

NP

hsa-miR-17-3p

NP

NP

hsa-miR-17-5p†

 

T(2)

hsa-miR-18a*

 

M(1)

hsa-miR-18a*

NP

NP

hsa-miR-20a†

 

T(2)

hsa-miR-24#

 

T(1)

hsa-miR-30e-3p

NP

NP

hsa-miR-30e-5p

NP

NP

hsa-miR-93†

 

T(1)

hsa-miR-103

NP

NP

hsa-miR-106a†

 

T(2)

hsa-miR-106b†

 

T(2)

hsa-miR-107

NP

NP

hsa-miR-125a§

 

M(2), T(2)

hsa-miR-125b

 

M(2)

hsa-miR-128†

 

M(1), T(1)

hsa-miR-133a#

 

M(1)

hsa-miR-141

NP

NP

hsa-miR-149#

 

M(1), T(1)

hsa-miR-151-3p

M(1)

 

hsa-miR-182

NP

NP

hsa-miR-185

M(1), P(1)

 

hsa-miR-188

 

M(1)

hsa-miR-198

 

M(1)

hsa-miR-200a

NP

NP

hsa-miR-200b

NP

NP

hsa-miR-204#

 

M(1), T(1)

hsa-miR-206

NP

NP

hsa-miR-211#

 

M(1), T(1)

hsa-miR-221

NP

NP

hsa-miR-296

 

M (1)

hsa-miR-324-5p§

 

M(1), T(1)

hsa-miR-326

 

M(2)

hsa-miR-330-3p¥

 

M(2), T(2)

hsa-miR-331

 

M(2)

hsa-miR-340

 

M(1)

hsa-miR-345¥

 

T(1)

hsa-miR-374

NP

NP

hsa-miR-384§

 

T(1)

hsa-miR-412

 

M(1)

hsa-miR-422a#

 

M(1), T(1)

hsa-miR-449

 

M(1)

hsa-miR-485-3p§

 

T(1)

hsa-miR-509¥

 

M(1), T(2)

hsa-miR-617¥

 

T(1)

hsa-miR-625¥

 

T(2)

hsa-miR-765¥

 

T(1)

hsa-miR-768-5p¥

 

T(1)

  1. M, miRanda; T, TargetScan; P, Pictar; NP, not
  2. predicted for either isoform; † and #, conserved
  3. sites and poorly conserved sites for miRNA families broadly
  4. conserved among vertebrates, respectively; §, poorly
  5. conserved sites for miRNA families conserved only among mammals;
  6. ¥, poorly conserved sites or poorly conserved miRNA families.
  7. The number of predicted sites is indicated in brackets.