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Table 1 ESTs, with similarity to known sequences, identified by enrichment for dehydration-induced gene expression in A. avenae.

From: Expression profiling and cross-species RNA interference (RNAi) of desiccation-induced transcripts in the anhydrobiotic nematode Aphelenchus avenae

Relative Expression
Accession no. Closest BLAST hit (organism)a Homologue accession no. BLAST score Desiccation Osmotic Heat Cold
EF026241 LEA protein (Caenorhabditis elegans) NM_001028871 0.001 42.6 24.1 3.1 7.9
EF026240 *LEA-like hypothetical protein (C. elegans) AF016513 0.002 35.9 21.8 2.8 47.2
GR463894 C-type lectin (clec-49) (C. elegans) NM_075428 2E-12 1.7 0.7 1.3 1.1
EF026242 *C-type lectin (clec-202) (C. elegans) NM_070694 2E-09 1.3 2.4 1.5 1.9
GR463895 polygalacturonase (Aspergillus clavatus) XM_001272238 5E-51 2.7 47.9 0.9 7.2
GR463896 polygalacturonase (Penicillium griseorseum) AF195791 1E-129 3.0 2.1 0.7 3.2
GR463897 AHA-1, activator of Hsp90 (Bombyx mori) myo-inositol-1-phosphate synthase (C. elegans) XM_001901615 2E-17 27.2 19.3 1.7 4.3
GR463898   NM_064098 8E-68 1.3 1.3 0.9 1.6
GR463899 GABA/glycine receptor (ggr-3) (C. elegans) NM_062550 5E-42 1.2 15.3 1.6 0.8
GR463900 hypothetical protein Y53G8B.4 (C. elegans) C2H2-type zinc finger protein (Brugia malayi) NM_001047419 3E-16 4.4 12.5 4.5 6.2
GR463901   XM_001900365 1E-104 2.6 5.2 2.7 3.5
GR463902 *MSFI-like/14-3-3 protein (C. elegans) NM_060551 1E-65 2.6 2.5 1.0 2.0
DR121003 vesicle transport (unc-16) (C. elegans) NM_001027810 2E-09 2.4 1.7 1.2 1.6
GR463903 DJ-1 like (Tribolium castaneum) XM_968208 4E-37 10.2 6.3 2.0 3.6
GR463904 *saposin (spp-3) (C. elegans) NM_076834 4E-05 1.8 2.0 1.8 3.0
GR463905 Sm-like protein (lsm-5) (C. elegans) NM_074469 1E-42 4.3 2.9 1.0 2.9
GR463906 dual specificity phosphatase F28C6.8 (C. elegans) NM_063425 3E-28 2.8 2.3 1.3 2.7
GR463907 Appr-1-p processing enzyme (B. malayi) XM_001901533 5E-21 1.3 3.1 1.7 1.9
GR463908 hypothetical protein F42A10.7 (C. elegans) NM_065940 1E-41 1.8 1.7 1.3 2.6
GR463909 aspartate protease inhibitor (Onchocercavolvulus) X13313 4E-35 2.5 4.9 2.7 8.2
GR463910 GATA-type zinc finger protein (B. malayi) XM_001892676 6E-14 2.6 1.9 1.4 2.0
GR463911 tropomyosin (Heterodera glycines) AF546757 1E-99 1.6 1.7 1.9 2.5
GR463912 transthyretin-related (Radopholus similis) AM691117 2E-36 4.3 2.9 0.7 5.6
GR463913 collagen family (col-14) (C. elegans) NM_001047459 1E-39 1.4 1.4 1.3 2.6
GR463914 glutathione peroxidase (Globodera rostochiensis) AJ493678 3E-56 31.9 14.3 1.6 7.6
GR463915 high mobility group protein (hmg1.1) (C. elegans) XM_001893327 3E-35 4.0 10.2 4.4 13.4
DR121009 zinc/RING finger protein (mnat-1) (C. elegans) NM_061879 3E-14 1.4 2.3 1.1 1.5
GR463916 Predicted ion channel (ced-11) (C. elegans) AJ272503 2E-06 1.1 17.6 2.1 0.7
GR463917 rhoGAP domain (B. malayi) XM_001894857 6E-36 2.2 1.5 1.4 0.8
GR463918 hypothetical protein ZK228.3 (C. elegans) Z82086.1 4E-04 1.2 2.0 1.4 2.0
  1. Where accession numbers are shown in bold, respective sequences were used in cross-species RNAi experiments with P. superbus. aClosest homologue in the GenBank database using the TBLASTX tool http://www.ncbi.nlm.nih.gov/blast; where indicated by an asterix, BLASTX against the C. elegans genome was used instead http://www.wormbase.org/db/searches/blast_blat. Relative expression following exposure of nematodes to four environmental stresses is shown at right of Table. Values in regular type represent a statistically significant upregulation in gene expression with respect to A. avenae 5.8S rRNA and ama-1 genes; values in grey font are not significant.