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Table 2 Backfat thickness associated miRNAs.

From: Characterization of microRNA expression in bovine adipose tissues: a potential regulatory mechanism of subcutaneous adipose tissue development

miRNA

Mean ± SD

(n = 24)

r (p-value)

miRNA location1

Gene description2

miR-378

1.33 ± 0.68

0.72 (<0.0001)

Intronic

peroxisome proliferator-activated receptor gamma, coactivator 1 beta (*)

miR-196a

5.39 ± 0.68

0.65 (0.0006)

Intergenic

 

bta-miR-3432

3.22 ± 0.47

0.48 (0.0177)

- (Intergenic)

 

miR-92a

2.75 ± 1.65

-0.58 (0.0028)

Intronic (Intergenic)

chromosome 13 open reading frame 25 (-)

miR-151-3p

3.27 ± 0.41

-0.53 (0.0076)

Intronic

protein tyrosine kinase 2

miR-151-5p

1.89 ± 0.67

-0.49 (0.0154)

Intronic

protein tyrosine kinase 2

miR-214

3.50 ± 1.37

-0.52 (0.0094)

Intronic

dynamin 3 (similar to dynamin 3)

miR-106b

2.68 ± 0.86

-0.49 (0.0151)

Intronic

mini-chromosome maintenance protein 7

miR-25

3.36 ± 1.53

-0.48 (0.0164)

Intronic

mini-chromosome maintenance protein 7

miR-93

3.43 ± 0.89

-0.43 (0.0343)

Intronic

mini-chromosome maintenance protein 7

miR-199b

3.59 ± 0.86

-0.48 (0.0188)

Intronic

dynamin 1

miR-10b

2.36 ± 0.98

-0.45 (0.0282)

Intergenic

 

miR-186

1.38 ± 0.41

-0.44 (0.0319)

Intronic

zinc finger, RAN-binding domain containing 2 (zinc finger protein 265)

miR-23b

2.24 ± 0.84

-0.43 (0.0386)

Intronic (Intergenic)

chromosome 9 open reading frame 3 (-)

miR-132

6.25 ± 0.63

-0.42 (0.0392)

Intergenic

 

miR-101

4.82 ± 0.57

-0.42 (0.0412)

Intronic

RNA terminal phosphate cyclase-like

miR-27a

-0.47 ± 0.69

-0.41 (0.0456)

Intergenic

 

miR-142-5p

3.41 ± 0.66

-0.41 (0.0487)

Intergenic

 
  1. 1miRNA location is listed. If the human/cattle positions are different, the cattle location is presented in parentheses. Data are from miRBase.
  2. 2Gene is listed. If the human/cattle genes are different, the cattle gene is presented in parentheses. Data are from miRBase, NCBI and Ensembl.
  3. '-' means not find so far. *This gene in bovine is named IPI00715774.3 (Ensembl) and shares homology to human PGC-1β (Blastp).