Name | Molecular Function (SGD curated)/Biological process | Primer sequence | Eff |
---|---|---|---|
Candidate reference genes | |||
ACT1 | Structural constituent of cytoskeleton/Cell polarization, endocytosis, and other cytoskeletal functions | F:ATTATATGTTTAGAGGTTGCTGCTTTGG R:CAATTCGTTGTAGAAGGTATGATGCC | 94 |
ALG9 | Mannosyltransferase activity/Protein amino acid glycosylation | F:CACGGATAGTGGCTTTGGTGAACAATTAC R:TATGATTATCTGGCAGCAGGAAAGAACTTGGG | 93 |
FPR2 | Membrane-bound peptidyl-prolyl cis-trans isomerase activity/Unknown | F:TCTTTATTAGAATCGGGAACTGTATTTGACTC R:AATGACGCCTGGGACACCTCTTTC | 89 |
HEM2 | Porphobilinogen synthase activity/Heme biosynthesis | F:TTCCGCTATTCATCTCCGATAATCCAG R:ACAGACATCGCAAATAATATACAGTTCAGG | 95 |
IPP1 | Inorganic diphosphatase activity/Phosphate metabolic process | F:CCCAATCATCCAAGACACCAAGAAGG R:AGCAATAGTTTCACCAATTTCCAACACATC | 90 |
KRE11 | Unknown/ER to Golgi vesicle-mediated transport | F:AACTGGTTCTGTTACCCAAATCAACTCAAC R:AACGCTTCAATGTGACTTCTGTTTCCC | 86 |
PDA1 | Pyruvate dehydrogenase activity/Pyruvate metabolism | F:ATTTGCCCGTCGTGTTTTGCTGTG R:TATGCTGAATCTCGTCTCTAGTTCTGTAGG | 93 |
RDN18 | Sstructural constituent of ribosome/Translation | F:AACTCACCAGGTCCAGACACAATAAGG R:AAGGTCTCGTTCGTTATCGCAATTAAGC | 93 |
RPN2 | Protein binding, bridging/Ubiquitin-dependent protein catabolic process | F:GCGGATACAGGCACATTGGATACC R:TGTTGCTACCTTCTCTACCTCCTTACC | 101 |
TAF10 | RNA Pol II transcription factor activity/Transcription initiation and chromatin modification | F:ATATTCCAGGATCAGGTCTTCCGTAGC R:GTAGTCTTCTCATTCTGTTGATGTTGTTGTTG | 96 |
TDH3 | Glyceraldehyde-3P dehydrogenase (phosphorylating) activity/Glycolysis & Gluconeogenesis | F:CGGTAGATACGCTGGTGAAGTTTC R:TGGAAGATGGAGCAGTGATAACAAC | 91 |
TFC1 | RNA Pol III transcription factor activity/Transcription initiation on Pol III promoter | F:GCTGGCACTCATATCTTATCGTTTCACAATGG R:GAACCTGCTGTCAATACCGCCTGGAG | 91 |
UBC6 | Ubiquitin-protein ligase activity/ER-associated protein catabolic process | F:GATACTTGGAATCCTGGCTGGTCTGTCTC R:AAAGGGTCTTCTGTTTCATCACCTGTATTTGC | 84 |
Genes of interest (GOIs) in glycogen metabolism | |||
GPH1 | Glycogen phosphorylase activity/Glycogen catabolic process | F:ACAAAACTCAGCAGAAATTCACCACAAG R:CAAGACGACCTAGACCACCATTACC | 90 |
GSY2 | Glycogen synthase activity/Glycogen biosynthetic process | F:TGCCCAGTATAAAGACCATTACCACTTGATAGG R:GCACCTTCAATCAGCCACCTCCCATAAAC | 86 |
SGA1 | glucan 1,4-alpha-glucosidase activity/Glycogen catabolic process | F:TCCAAACGGATATTTCCTGGGTGGTACTGAG R:GCATGATCTATTGTGTTTACATTAGCGGGTAG | 89 |