Table 1 Reference genes used for gene expression normalization in soybean.
Gene symbol | Gene locus | NCBI Accession No. | Unigene ID | Arabidopsis ortholog locus | Arabidopsis locus description | Function |
|---|---|---|---|---|---|---|
ACT11 | Glyma18g52780.1 | BW652479 | Gma.32186 | AT3G12110 | Actin 11 | Cytoskeletal structural protein |
ACT2/7 | Glyma04g39380.1 | BW677100 | Gma.30938 | AT5G09810 | Actin 2/7 | Cytoskeletal structural protein |
CYP | Glyma12g02790.1 | CF806591 | Gma.31618 | AT2G21130 | Cyclophilin | Protein folding |
EF1b | Glyma02g44460.1 | EV279336 | Gma.2137 | AT5G12110 | Elongation factor 1β | Translational elongation |
TUA5 | Glyma05g29000.1 | CA801144 | Gma.13580 | AT5G19780 | alpha Tubulin | Structural constituent of cytoskeleton |
TUB4 | Glyma03g27970.1 | EV263740 | Gma.31016 | AT5G12250 | beta Tubulin | Structural constituent of cytoskeleton |
UBQ10 | Glyma07g32020.1 | EH258122 | Gma.17451 | AT4G05320 | Ubiquitin 10 | Protein binding, protein modification |
HDC | Glyma08g05480.1 | CK768960 | Gma.34482 | AT1G58050 | Nuclear helicase | Unwinding of the DNA double-helix |
SKIP16 | Glyma12g05510.1 | CD397253 | Gma.6079 | AT1G06110 | SKP1/Ask-Interacting Protein 16 | Protein binding |
MTP | Glyma03g29350.2 | CF808703 | Gma.7635 | AT2G41790 | Metalloprotease, Insulin degrading enzyme | Protein degradation |
PEPKR1 | Glyma10g38460.1 | AW396185 | Gma.23799 | AT1G12580 | Phosphoenolpyruvate Carboxylase-Related Kinase 1 | Protein phosphorylation |
TIP41 | Glyma20g26690.1 | EV263725 | Gma.10647 | At4G34270 | TIP41-like family protein | TOR (Target of Rapamycin) signalling element |
UKN1 | Glyma12g02310.1 | BU578186 | Gma.32694 | AT3G13410 | Hypothetical protein | Unkown |
UKN2 | Glyma06g04180.1 | BE330043 | Gma.20882 | AT4G33380 | Hypothetical protein | Unkown |