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Table 2 Distribution of -log(K d ) values of TFs binding sequences and -log(K p ) values of their corresponding promoter sequences.

From: From sequence to dynamics: the effects of transcription factor and polymerase concentration changes on activated and repressed promoters

TF

Units

- log(Kd)

- log(Kp)

  

Mean

SD

Max

Min

M-SD

M+SD

Mean

SD

Max

M-SD

M+SD

Min

Ada

1

12.33

0

12.33

12.33

12.33

12.33

6.03

0

6.03

6.03

6.03

6.03

ArgR

2

7.36

1.47

8.39

6.33

5.90

8.83

7.06

0

7.06

7.06

7.06

7.06

CpxR

1

6.43

0

6.43

6.43

6.43

6.43

5.42

0

5.42

5.42

5.42

5.42

CRP

7

6.46

0.22

7.84

5.17

6.24

6.68

6.00

0.22

6.30

5.78

6.22

5.676

CsgD

1

8.23

0

8.23

8.23

8.23

8.23

6.68

0

6.68

6.68

6.68

6.68

CysB

2

11.62

0.16

11.73

11.51

11.46

11.78

7.19

0.14

7.29

7.05

7.33

7.0935

FIS

42

6.26

1.16

8.64

5.50

5.09

7.42

7.20

0.38

7.82

6.83

7.58

5.50

FNR

1

7.88

0

7.88

7.88

7.88

7.88

7.98

0

7.98

7.98

7.98

7.98

FruR

2

9.57

0.19

9.70

9.43

9.37

9.76

7.20

0.31

7.42

6.90

7.51

6.99

Fur

9

9.18

1.62

10.70

6.46

7.56

10.80

6.54

0.70

8.07

5.85

7.24

5.96

LexA

8

8.84

1.48

10.15

5.80

7.36

10.32

6.96

0.54

7.45

6.42

7.49

6.11

Lrp

1

5.07

0

5.07

5.07

5.07

5.07

7.35

0

7.35

7.35

7.35

7.35

MarA

1

8.08

0

8.08

8.08

8.08

8.08

6.80

0

6.80

6.80

6.80

6.80

NagC

4

8.91

0.11

9.00

8.82

8.80

9.02

7.01

0

7.01

7.01

7.01

7.01

PhoB

1

9.22

0

9.22

9.22

9.22

9.22

6.41

0

6.41

6.41

6.41

6.41

PhoP

2

4.58

0

4.58

4.58

4.58

4.58

7.03

0

7.03

7.03

7.03

7.03

PurR

3

9.22

1.18

10.58

8.54

8.04

10.40

6.71

0.03

6.73

6.69

6.74

6.68

TrpR

6

11.08

0.68

11.62

9.93

10.41

11.76

6.54

0.49

7.07

6.06

7.03

6.10

TyrR

11

7.96

1.17

9.76

5.78

6.80

9.13

6.84

0.57

7.67

6.27

7.41

6.34

  1. M-SD: mean minus one standard deviation; M+SD: mean plus one standard deviation.