Gene | Accession number | Species | Primer sequence | Fragment length | Annealing | Extension | Fluorescence | Slope |
---|---|---|---|---|---|---|---|---|
HNF4α | NM_000457 | human | fwd:CTGCTCGGAGCCACCAAGAGATCCATG | 371 bp | 60°C | 15 sec | 88°C | -3.629 |
rev: ATCATCTGCCAGGTGATGCTCTGCA | ||||||||
HNF4αP1 | NM_178849 | human | fwd: GAATGCGACTCTCCAAAACC | 339 bp | 68°C | 14 sec | 88°C | -3.058 |
NM_178850 | rev: GGCACTGGTTCCTCTTGTCT | |||||||
NM_000457 | ||||||||
HNF4αP2 | NM_001030003 | human | fwd: GGGCTCCAGTGGAGAGTTC | 342 bp | 68°C | 14 sec | 88°C | -2.648 |
rev: CATAGCTTGACCTTCGAGTGC | ||||||||
FOXJ1 | NM_001454 | human | fwd: CTACTCGTATGCCACGCTCA | 183 bp | 60°C | 8 sec | 86°C | -3.459 |
rev: CGAGGCACTTTGATGAAGC | ||||||||
IGF2 | NM_000162 | human | fwd: GGTGCTTCTCACCTTCTTGG | 298 bp | 68°C | 12 sec | 90°C | -2.724 |
rev: GGGGTATCTGGGGAAGTTGT | ||||||||
TTR | NM_000371 | human | fwd: CAGAAAGGCTGCTGATGACA | 261 bp | 60°C | 11 sec | 86°C | -3.438 |
rev: GCCGTGGTGGAATAGGAGTA | ||||||||
ABCB1 | NM_000927 | human | fwd: AAAAAGATCAACTCGTAGGAGTG | 161 bp | 60°C | 7 sec | 81°C | -3.331 |
rev: GCACAAAATACACCAACAA | ||||||||
ABCB4 | NM_000443 | human | fwd: CCACAGCGAACTGATGAAGA | 301 bp | 68°C | 13 sec | 83°C | -3.826 |
rev: CACGACAAAGTAGGGCCATT | ||||||||
ABCC1 | NM_004996 | human | fwd: AGTCCCCACAGAAGGAGTGG | 358 bp | 60°C | 15 sec | 87°C | -3.639 |
rev: TCCCCGACCGTGGAGGATTT | ||||||||
ABCC2 | NM_000392 | human | fwd: CCGTATCAGGTTTGCCAGTT | 312 bp | 60°C | 13 sec | 84°C | -3.756 |
rev: CAACAGCCACAATGTTGGTC | ||||||||
ABCC3 | NM_003786 | human | fwd: CTCAATGTGGCAGACATCGG | 177 bp | 60°C | 8 sec | 87°C | -3.731 |
rev: GGGAGCTCACAAACGTGTGC | ||||||||
ABCC4 | NM_005845 | human | fwd CTTGGAGAGGAGTTGCAAGG | 236 bp | 68°C | 10 sec | 78°C | -4.479 |
NM_001105515 | rev: GCTGTGTTCAAAGCCACAGA | |||||||
ABCC5 | NM_005688 | human | fwd: CCTGTTTGGGAAGGAATATGA | 203 bp | 60°C | 9 sec | 88°C | -3.446 |
rev: CCTGTTTGGGAAGGAATATGA | ||||||||
ABCC6 | NM_001171 | human | fwd: TTCTCTGTGTCGCTGGTGTC | 309 bp | 60°C | 13 sec | 87°C | -2.982 |
rev: GGCACTGTGTATGGTGATGC | ||||||||
MitATPase6 | NC_001807 | human | fwd: CTAAAGGACGAACCTGA | 315 bp | 55°C | 13 sec | 83°C | -3.608 |
rev: TGGCCTGCAGTAATGTT | ||||||||
HNF4α | NM_022180 | rat | fwd: GCCTGCCTCAAAGCCATCAT | 274 bp | 55°C | 11 sec | 88°C | -3.697 |
rev: GACCCTCCAAGCAGCATCTC | ||||||||
HNF4αP1 | D10554, EF193392 | rat | fwd: AAATGTGCAGGTGTTGACCA | 178 bp | 60°C | 7 sec | 87°C | -3.296 |
rev: CACGCTCCTCCTGAAGAATC | ||||||||
HNF4αP2 | AF329936 | rat | fwd: CTCCAGTGGCGAGTCCTTAT | 171 bp | 60°C | 7 sec | 87°C | -2.273 |
EF193390 | rev: TCACGCTCCTCCTGAAGAAT | |||||||
MitATPase6 | NC_001665 | rat | fwd: CTAAAGGACGAACCTGA | 315 bp | 55°C | 13 sec | 83°C | -3.644 |
rev: TGGCCTGCAGTAATGTT |