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Table 3 Shift-probes sequences.

From: Expression of HNF4alpha in the human and rat choroid plexus – Implications for drug transport across the blood-cerebrospinal-fluid (CSF) barrier

Gene

Oligo name

Sequence

Human

  

HNF1α

HNF1pro

AGGGCTGA AGTCCA A AGTTCA GTCCCTTC

ABCB4

hABCB4_1 (GS49)

AGAA AGGTCA A AGGCAA AGCA

 

hABCB4_2 (GS50)

GTGC AGGGCA A AGGTCA GATT

 

hABCB4_3 (GS51)

GCTA AGTCCA A AGATCA ATTC

ABCC1

hABCC1_1 (GS48)

TTGAC AGTATA A AGGTCA AGCAA

 

hABCC1_2 (GS171)

TTCAT AGAGCA A AGTACA GCAAC

Rat

  

ABCB4

rABCB4_1 (GS166)

AGAAG CCCTCA A AGTCCA CCTAT

 

rABCB4_2 (GS167)

CGCAG CGAGCA A AGTCCA GGTCT

ABCC1

rABCC1_1 (GS169)

GACAC GGGCCA A AGACCC ACAGA

Mouse

  

ABCB4

mABCB4_1 (GS168)

ATAGC CATGCA A AGTCCA AAAGA

ABCC1

mABCC1_1 (GS170)

TCCCT TGTGCA A AGGTCT AGGAT

  1. The central five nucleotides of the HNF4α binding site are highlighted in bold letters. The two direct repeats (DR1) separated by a spacer of one nucleotide are underlined.