Table 2 Predicted binding sites for HNF4α in ABC genes.
Gene name | Accession number | bp relative to transcription start site | Score core/matrix | |
|---|---|---|---|---|
Human | ||||
ABCB4 | NM_000443.3 | -6274 to -6252 | V$zemlin13_11045 | 1.000/0.896 |
-4680 to -4658 | V$HNF4_01 | 1.000/0.990 | ||
V$zemlin13_1104 | 1.000/0.997 | |||
-4063 to -4041 | V$HNF4_01 | 1.000/0.954 | ||
V$zemlin13_11045 | 1.000/0.958 | |||
ABCC1 | NM_004996.3 | -1756 to -1734 | V$HNF4_01 | 0.915/0.925 |
-5266 to -5244 | V$HNF4_01 | 1.000/0.944 | ||
V$zemlin13_11045 | 1.000/0.969 | |||
Rat | ||||
ABCB4 | NM_012690.1 | -4584 to -4562 | V$zemlin13_11045 | 1.000/0.894 |
-39 to -17 | V$HNF4_01 | 1.000/0.943 | ||
V$zemlin13_11045 | 1.000/0.978 | |||
ABCC1 | NM_022281.2 | -2146 to -2124 | V$HNF4_01 | 1.000/0.908 |
Mouse | ||||
ABCB4 | NM_008830.2 | -5281 to -5259 | V$zemlin13_11045 | 1.000/0.907 |
ABCC1 | NM_008576.2 | +2626 to +2648 (Intron 1) | V$HNF4_01 | 1.000/0.924 |
V$zemlin13_11045 | 1.000/0.910 |