From: The STAR RNA binding proteins GLD-1, QKI, SAM68 and SLM-2 bind bipartite RNA motifs
Ligand | Sequence | n |
---|---|---|
Class I | ||
SRE-1 (1) | UUUGGGCCCUUCUAAA GAAAUUUUCACUAUCCUAUUAA CAGUUCCGCCGCUC | 1 |
SRE-2 (2) | CGUAGGCGCAUCGUUAAA AAUUCAAAGCAAAAAUUGUGUUUAA CUGGGGGA- | 2 |
SRE-3 (2) | ACGCGCUUUUAA CGUGCCCUUACAUCCGCUAAA AACUAAA CUCUGACCAUUU | 2 |
SRE-4 (28) | UUUGGGGGUUCAAUAAA AAUUUUCACUAUCCUAUUAA CAGUUCCGCCGCUCC | 28 |
SRE-5 (1) | UUUGGGGGUUCUAUAAA AAUUUUCACUAUCCUAUUAA CAGUUCCGCCGCUCC | 1 |
SRE-6 (2) | ACAGCACGUUUUAA CUUUUUGCUAAUUAUUCCUUAAA AUUCCUCCUCCUCUU | 2 |
SRE-7 (2) | AUCGUGGUGGGCGGUUAA UUUGGAUUUCUUGAGCUUAUGGCUUUUAA UAUGG | 2 |
SRE-8 (1) | GUGCGAUCUGUGUUUAA UCAUUGUUCUGUUUCGCUCUAAA UUUUUCGCCGCU | 1 |
Class II | ||
SRE-9 (2) | GCGGUUACGGGAUCCAUGUAGACGCACAUAUUAUAUGGGAUUAGGUAGACUG | 2 |
SRE-10 (1) | GCUGGGGGUUGAUCCACUAUUUCCACAGCGGCAGCAACAGUUCCGCCACUUC | 1 |
SRE-11 (1) | AUCGGGGGGGGCGGUUAA UUUGGACUACCCGAGCAUCAGGUCCUCCGCUGGG | 1 |