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Table 3 Primers

From: Expansion of a chromosomal repeat in Escherichia coli: roles of replication, repair, and recombination functions

Primer

Sequence

ADA1

GATTATGAAAAAAGCCACATGCTTAACTGACGATCAACGCACGTTGTGTCTCAAAATCTC

ADA2

CTCCTCATTTTCAGCTTCGCGGCGCAGCAGTTGCGCTTTACAACCAATTAACCAATTCTG

cat15

TCTGGTGGCCGGAAGGCGAAGCGGCATGCATTTACGTTGAATGAGACGTTGATCGGCACG

cat16

AGAGTACATCTCGCCGTTTTTTCTCAATTCATGGTGTACAATTCAGGCGTAGCACCAGGC

din7

GCTGGATAAGCAGCAGGTGCTTTCGCAGCGAACGCGTTAACTCGACATCTTGGTTACCGT

din8

ACCAGTTGTCTTTCCATTTGCGGGTCAAGCAACGTCACATCGCGGAATAACATCATTTGG

LAT2

AAGAAAGCCTGACTGGCGGTTAAATTGCCAACGCTTATTATTATTTGCCGACTACCTTGG

LAT3

GACGGGTTGTTACTCGCTCACATTTAATGTTGATGAAAGCAAACGGATGAAGGCACGAA

malF1

GTCCTGGAATGAGGAAGAACCCCATGGATGTCATTAAAAAAAACGGATGAAGGCACGAA

malF2

CCCTTAATCAAACTTCATTCGCGTGGCTTTCAGGTTCACTTTATTTGCCGACTACCTTGG

mutH1

TTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCCTCGACATCTTGGTTACCGT

mutH2

GCGATGGCTACTGGATCAGAAAATGACGGGCCAGTAGTGCCGCGGAATAACATCATTTGG

mutM1

GCATCTGTTCATTCCTGGAGATGCTATGCCTGAATTACCCCTCGACATCTTGGTTACCGT

mutM2

TCCGGCGCGCATGAATTACTTCTGGCACTGCCGACAATAACGCGGAATAACATCATTTGG

mutY1

CAACAGTGAATTCGGTGACCATGCAAGCGTCGCAATTTTCACGTTGTGTCTCAAAATCTC

mutY2

CTTTATCGACTCACGCGCTAAACCGGCGCGCCAGTGCGTACAACCAATTAACCAATTCTG

polB1

GTGGCGCAGGCAGGTTTTATCTTAACCCGACACTGGCGGGCTCGACATCTTGGTTACCGT

polB2

AGTGGTGAACGTTGGTAGTCCAGCGGCTCCGGGCCGTTGGCGCGGAATAACATCATTTGG

priA1

GATGCTATGCCCGTTGCCCACGTTGCCTTGCCCGTTCCGCACGTTGTGTCTCAAAATCTC

priA2

GGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTACAACCAATTAACCAATTCTG

recA3

TTACCCGGCATGACAGGAGTAAAAATGGCTATCGACGAACACGTTGTGTCTCAAAATCTC

recA4

CCCTTGTGTATCAAACAAGACGATTAAAAATCTTCGTTTACAACCAATTAACCAATTCTG

recJ1

ACAGATACAACTTCGTCGCCGTGAAGTCGATGAAACGGCACTCGACATCTTGGTTACCGT

recJ2

GCAGTGGACCGCCGCCGACCGGTTCGACCATCACCTTCAACGCGGAATAACATCATTTGG

relA1

GGACGATGGTTGCGGTAAGAAGTGCACATATCAATAAGGCACGTTGTGTCTCAAAATCTC

relA2

GGTCATGTCGATGGTCGCCAGTTGCTGTTTGGTGTCGCTACAACCAATTAACCAATTCTG

rnhA1

GGCAATCCAGGACCTGGGGGTTACGGCGCTATTTTACGCTCTCGACATCTTGGTTACCGT

rnhA2

GCCGCGGCACGAGCCAGTTCATCACAGCGTTCGTTTTCCGCGCGGAATAACATCATTTGG

rpoS1

CGGGTAGGAGCCACCTTATGAGTCAGAATACGCTGAAAGTCTCGACATCTTGGTTACCGT

rpoS2

CCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGCGGAATAACATCATTTGG

Toc1

GATCCCGCGGAATAACATCATTTGGTGACGAAATAACTAAATGAGACGTTGATCGGCACG

Toc2

CCACGATGCGTCCGGCGTAGAGGATCTGAAGATCAGCAGTATTCAGGCGTAGCACCAGGC

umDC1

CAGATTATTATGTTGTTTATCAAGCCTGCGGATCTCCGCGCTCGACATCTTGGTTACCGT

umDC2

CCTGCCGCTATATTTATTTGACCCTCAGTAAATCAGAACTCGCGGAATAACATCATTTGG

uvrD1

AACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTCGACATCTTGGTTACCGT

uvrD2

CTGGCCCTGAAATGCCACCTGCAAACGGCTATGCTCACCGCGCGGAATAACATCATTTGG

yfgL1

TCTGAGAGGGACCCGATGCAATTGCGTAAATTACTGCTGCACGTTGTGTCTCAAAATCTC

yfgL2

GCCGTCAGCGGCAACCGGTTCAGTCTGGAAACCGGAACTACAACCAATTAACCAATTCTG